RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 PMP22Q01453 160 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 ARL16Q0P5N6 197 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 LTC4SQ16873 150 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 HIKESHIQ53FT3 197 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 LINC00696Q6ZRV3 163 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 ZDHHC23Q8IYP9 409 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
PGBD1-201ENST00000259883 SLC34A2O95436 690 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CA6P23280 308 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 FOLR3P41439 243 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CEBPDP49716 269 aaPredicted RBP11.31□□□□□ -0.6
PGBD1-201ENST00000259883 MKXQ8IYA7 352 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
PGBD1-201ENST00000259883 FAM210BQ96KR6 192 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 DECR2Q9NUI1 292 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 LOC102725191A0A1B0GVB3 256 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 OR6C6A6NF89 314 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 ZNF705GA8MUZ8 300 aaPredicted RBP11.31□□□□□ -0.6
PGBD1-201ENST00000259883 RPL36A-HNRNPH2H7BZ11 118 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 PGLYRP1O75594 196 aaPredicted RBP11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CST2P09228 141 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 LINC00205P59089 165 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 GGNQ86UU5 652 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 GATAD1Q8WUU5 269 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 IMMP1LQ96LU5 166 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
PGBD1-201ENST00000259883 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 SLC25A22Q9H936 323 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 TAAR3PQ9P1P4 343 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 SEMA5BQ9P283 1151 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 ZNF716A6NP11 495 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 IFNL4K9M1U5 179 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 PHOX2AO14813 284 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CDS2O95674 445 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 IGHV3-7P01780 117 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 EGR1P18146 543 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 VDAC1P21796 283 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 RAB1AP62820 205 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 HIST1H3AP68431 136 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 TLE4Q04727 773 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 TMPRSS7Q7RTY8 843 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CARFQ8N187 725 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 AGBL5Q8NDL9 886 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 OR2V1Q8NHB1 315 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 OR10J5Q8NHC4 309 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 CLDND2Q8NHS1 167 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 DNASE2BQ8WZ79 361 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 SIGLEC12Q96PQ1 595 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 Q9N2K0 584 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
PGBD1-201ENST00000259883 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
PGBD1-201ENST00000259883 A0A1B0GV90 55 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 CD300LBA8K4G0 201 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
PGBD1-201ENST00000259883 HOXA5P20719 270 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 TMEM211Q6ICI0 200 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 CDX1P47902 265 aaPredicted RBP11.3□□□□□ -0.6
PGBD1-201ENST00000259883 FIP1L1Q6UN15 594 aaKnown RBP11.3□□□□□ -0.6
PGBD1-201ENST00000259883 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
PGBD1-201ENST00000259883 A0A087WZY1 265 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 A0A0U1RQK1 487 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 CA11O75493 328 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 CLDN1O95832 211 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 KRASP01116 189 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 PDGFBP01127 241 aaPredicted RBP11.29□□□□□ -0.6
PGBD1-201ENST00000259883 PAX9P55771 341 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 Q0VFX4 171 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 ZNF816Q0VGE8 651 aaPredicted RBP11.29□□□□□ -0.6
PGBD1-201ENST00000259883 USF2Q15853 346 aaPredicted RBP11.29□□□□□ -0.6
PGBD1-201ENST00000259883 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 SAP25Q8TEE9 199 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 ATP5SQ99766 215 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 HNF1AP20823 631 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 CLN3Q13286 438 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 SPEM1Q8N4L4 309 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 RBKSQ9H477 322 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 LAMP3Q9UQV4 416 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 GJE1A6NN92 205 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 TCEAL6Q6IPX3 200 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
PGBD1-201ENST00000259883 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
PGBD1-201ENST00000259883 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
PGBD1-201ENST00000259883 B3GALT5-AS1P59052 145 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 TPRX1Q8N7U7 411 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 PLPPR1Q8TBJ4 325 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 TMEM37Q8WXS4 190 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 GNPNAT1Q96EK6 184 aaPredicted RBP11.28□□□□□ -0.6
PGBD1-201ENST00000259883 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 FAM234AQ9H0X4 552 aa11.28□□□□□ -0.6
PGBD1-201ENST00000259883 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms