RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TLE1Q04724 770 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 TFF3Q07654 80 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 AESQ08117 197 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 PRR18Q8N4B5 295 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 RRNAD1Q96FB5 475 aaKnown RBP15.85■□□□□ 0.13
TRIM47-201ENST00000254816 RNF126Q9BV68 326 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 DNAJB11Q9UBS4 358 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 TRAPPC2LQ9UL33 140 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 C14orf166Q9Y224 244 aaKnown RBP15.85■□□□□ 0.13
TRIM47-201ENST00000254816 WIPI2Q9Y4P8 454 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 IGSF10Q6WRI0 2623 aa15.85■□□□□ 0.13
TRIM47-201ENST00000254816 KIR2DS1A0A191URI9 304 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 C17orf100A8MU93 164 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 A8MXK9 166 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 CYB5R3P00387 301 aaPredicted RBP15.84■□□□□ 0.13
TRIM47-201ENST00000254816 RPS2P15880 293 aaKnown RBP15.84■□□□□ 0.13
TRIM47-201ENST00000254816 TNFSF4P23510 183 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 CD80P33681 288 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 KIR2DS4P43632 304 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 GATA4P43694 442 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 KIR2DS1Q14954 304 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 SURF2Q15527 256 aaPredicted RBP15.84■□□□□ 0.13
TRIM47-201ENST00000254816 TUSC1Q2TAM9 212 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 LRRC46Q96FV0 321 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 OR10C1Q96KK4 312 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 SLC25A32Q9H2D1 315 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 METTL8Q9H825 291 aaKnown RBP15.84■□□□□ 0.13
TRIM47-201ENST00000254816 ARID1AO14497 2285 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 IGKV1D-17A0A075B6S4 117 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 LHBP01229 141 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 FGF2P09038 288 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 ZNF728P0DKX0 622 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 PRDX2P32119 198 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 HLA-DRB3P79483 266 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 SHEQ5VZ18 495 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 BVESQ8NE79 360 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 KIRREL1Q96J84 757 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 RAB18Q9NP72 206 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 DECR2Q9NUI1 292 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 DCAF16Q9NXF7 216 aa15.84■□□□□ 0.13
TRIM47-201ENST00000254816 ZG16O60844 167 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 PPYP01298 95 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 HOXB5P09067 269 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 CFHR2P36980 270 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 GABRA2P47869 451 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 OR3A1P47881 315 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 SLC38A6Q8IZM9 456 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 TPRX1Q8N7U7 411 aa15.83■□□□□ 0.13
TRIM47-201ENST00000254816 ARFGEF3Q5TH69 2177 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 USP24Q9UPU5 2620 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 ECI1P42126 302 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 GAPTQ8N292 157 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 IL1F10Q8WWZ1 152 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 MOB3AQ96BX8 217 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 ARPC5LQ9BPX5 153 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 MS4A7Q9GZW8 240 aaPredicted RBP15.83■□□□□ 0.12
TRIM47-201ENST00000254816 OR5AC2Q9NZP5 309 aa15.83■□□□□ 0.12
TRIM47-201ENST00000254816 MEX3AA1L020 520 aaKnown RBP15.82■□□□□ 0.12
TRIM47-201ENST00000254816 CTSDP07339 412 aaPredicted RBP15.82■□□□□ 0.12
TRIM47-201ENST00000254816 HERV-K104P61576 105 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 STPG2Q8N412 459 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 COQ2Q96H96 371 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 SHARPINQ9H0F6 387 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 RNF7Q9UBF6 113 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 PPP1R3CQ9UQK1 317 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 RNF115Q9Y4L5 304 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 CACNA1BQ00975 2339 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 VSTM5A8MXK1 200 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 IFNL4K9M1U5 179 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 TK1P04183 234 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 CYCSP99999 105 aaKnown RBP15.82■□□□□ 0.12
TRIM47-201ENST00000254816 PHLDA2Q53GA4 152 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 LILRB1Q8NHL6 650 aaPredicted RBP15.82■□□□□ 0.12
TRIM47-201ENST00000254816 PIK3IP1Q96FE7 263 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 GSKIPQ9P0R6 139 aa15.82■□□□□ 0.12
TRIM47-201ENST00000254816 A0A0B4J2A0 478 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 MSGN1A6NI15 193 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 B8ZZF3 427 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 SIGLEC5O15389 551 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 PIGPP57054 158 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 C4orf17Q53FE4 359 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 HSD17B13Q7Z5P4 300 aaPredicted RBP15.81■□□□□ 0.12
TRIM47-201ENST00000254816 OR11L1Q8NGX0 322 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 BARX1Q9HBU1 254 aaPredicted RBP15.81■□□□□ 0.12
TRIM47-201ENST00000254816 CISD1Q9NZ45 108 aaKnown RBP15.81■□□□□ 0.12
TRIM47-201ENST00000254816 OR1A1Q9P1Q5 309 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 SHPKQ9UHJ6 478 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 ANKHD1Q8IWZ3 2542 aaKnown RBP15.81■□□□□ 0.12
TRIM47-201ENST00000254816 LRBAP50851 2863 aa15.81■□□□□ 0.12
TRIM47-201ENST00000254816 TMEM30CPA0ZSE6 113 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 H7C1Q1 480 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 M6PRP20645 277 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 APOBEC3AP31941 199 aaPredicted RBP15.8■□□□□ 0.12
TRIM47-201ENST00000254816 GLIPR1P48060 266 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 DEFB108BQ8NET1 73 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 OR4A4PQ8NGN8 299 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 MBNL3Q9NUK0 354 aaKnown RBP15.8■□□□□ 0.12
TRIM47-201ENST00000254816 TRBV6-7A0A0A0MS04 114 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 IGKV1D-13A0A0B4J2D9 117 aa15.8■□□□□ 0.12
TRIM47-201ENST00000254816 TEX13DA0A0J9YY54 714 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms