RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 IGKV1D-16P01601 117 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 CTAG1AP78358 180 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 ZXDCQ2QGD7 858 aaPredicted RBP12.06□□□□□ -0.48
HCFC2-201ENST00000229330 RFESDQ8TAC1 157 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 SSMEM1Q8WWF3 244 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 COA4Q9NYJ1 87 aa12.06□□□□□ -0.48
HCFC2-201ENST00000229330 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 RPL36A-HNRNPH2H7BZ11 118 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 NDUFB4O95168 129 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 SRSF3P84103 164 aaKnown RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 ZNF506Q5JVG8 444 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 FAM60AQ9NP50 221 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 LHX9Q9NQ69 397 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 SPAG17Q6Q759 2223 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 DHRS7CA6NNS2 312 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 CLEC3BP05452 202 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 CA6P23280 308 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 ZNF519Q8TB69 540 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 ISLRO14498 428 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 OR2J3O76001 311 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 SP1P08047 785 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 RPS23P62266 143 aaKnown RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 RNF2Q99496 336 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 MRPL18Q9H0U6 180 aaKnown RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 OR6C3Q9NZP0 311 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 TNS1Q9HBL0 1735 aaKnown RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 C5orf67F2Z3F1 127 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 POU2F2P09086 479 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 CXorf66Q5JRM2 361 aaPredicted RBP12.05□□□□□ -0.48
HCFC2-201ENST00000229330 SPOCK3Q9BQ16 436 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 DECR2Q9NUI1 292 aa12.05□□□□□ -0.48
HCFC2-201ENST00000229330 C5orf52A6NGY3 159 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 PATE4P0C8F1 98 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 AGAP20933 346 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 DEFB108BQ8NET1 73 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 OR1L4Q8NGR5 311 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 SMPD2O60906 423 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 GPR3P46089 330 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
HCFC2-201ENST00000229330 OR1C1Q15619 314 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM52Q8NDY8 209 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 BLNKQ8WV28 456 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 R3HDM4Q96D70 268 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 GALNT14Q96FL9 552 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 SPSB2Q99619 263 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 NUDT16L1Q9BRJ7 211 aaKnown RBP12.04□□□□□ -0.48
HCFC2-201ENST00000229330 A0A087WWC5 75 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 OR5B21A6NL26 309 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 FOLR2P14207 255 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 GNG10P50151 68 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 RPS11P62280 158 aaKnown RBP eCLIP12.04□□□□□ -0.48
HCFC2-201ENST00000229330 DTX4Q9Y2E6 619 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 KLF4O43474 513 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 TNFSF14O43557 240 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 LMX1BO60663 402 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 GALNSP34059 522 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 C16orf47Q6ZP98 133 aaPredicted RBP12.04□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM56Q96MV1 263 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 NEUROG3Q9Y4Z2 214 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 CKAP5Q14008 2032 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 LRRC75AQ8NAA5 344 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 CPEB3Q8NE35 698 aaKnown RBP12.04□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM204Q9BSN7 226 aa12.04□□□□□ -0.48
HCFC2-201ENST00000229330 PPP1CAP62136 330 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 DMWDQ09019 674 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 ZNF718Q3SXZ3 478 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 MAFAQ8NHW3 353 aaPredicted RBP12.03□□□□□ -0.48
HCFC2-201ENST00000229330 GABRG3Q99928 467 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 FGF16O43320 207 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 NGFRP08138 427 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 HOXC4P09017 264 aaPredicted RBP12.03□□□□□ -0.48
HCFC2-201ENST00000229330 OPRK1P41145 380 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 PLP1P60201 277 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 LINC01590Q5TEZ4 76 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 TMEM178AQ8NBL3 297 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 ASCC3Q8N3C0 2202 aaKnown RBP12.03□□□□□ -0.48
HCFC2-201ENST00000229330 IGHV3-43A0A0B4J1X8 118 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 IGHV3-43DP0DP04 118 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 FNDC7Q5VTL7 733 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 CADM4Q8NFZ8 388 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 OR8G5Q8NG78 346 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 Q8WTZ3 238 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 TXNDC17Q9BRA2 123 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 DNAJC4Q9NNZ3 241 aa12.03□□□□□ -0.48
HCFC2-201ENST00000229330 DXOO77932 396 aaKnown RBP12.02□□□□□ -0.48
HCFC2-201ENST00000229330 GNRHR2Q96P88 292 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 IGHV5-51A0A0C4DH38 117 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 A0A1B0GTI1 187 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 PEBP1P30086 187 aaKnown RBP12.02□□□□□ -0.48
HCFC2-201ENST00000229330 G6PCP35575 357 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 HES1Q14469 280 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 FDX2Q6P4F2 183 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 BIVMQ86UB2 503 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms