RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 HSMCR30P0CW71 290 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 TMEM11P17152 192 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 LOXL3P58215 753 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 NKAPLQ5M9Q1 402 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 LIPKQ5VXJ0 399 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 OR10K2Q6IF99 312 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 MOB3BQ86TA1 216 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 LRRTM1Q86UE6 522 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 THNSL2Q86YJ6 484 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 OR10V1Q8NGI7 309 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 OR52M1Q8NGK5 317 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 UFD1Q92890 307 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 TMEM203Q969S6 136 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 TPRKBQ9Y3C4 175 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 M0QZK8 103 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 SLC31A2O15432 143 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 SPINT2O43291 252 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 IGKV1D-33P01593 117 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 IGKV1-33P01594 117 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 HBZP02008 142 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 GAPDHP04406 335 aaKnown RBP11.32□□□□□ -0.6
GPN3-201ENST00000228827 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
GPN3-201ENST00000228827 FUT3P21217 361 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 MYF6P23409 242 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 SLC35A2P78381 396 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 EMX1Q04741 257 aaPredicted RBP11.32□□□□□ -0.6
GPN3-201ENST00000228827 IRF3Q14653 427 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 HSD17B12Q53GQ0 312 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 C6orf183Q5T699 404 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 GLT8D1Q68CQ7 371 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 CCDC90BQ9GZT6 254 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 CST11Q9H112 138 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 GNG12Q9UBI6 72 aa11.32□□□□□ -0.6
GPN3-201ENST00000228827 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A10PA6NDY2 464 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A7PA6NKC0 464 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 FAM90A23PA8MXZ1 464 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 RGS10O43665 173 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 PDCD6O75340 191 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 CD83Q01151 205 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
GPN3-201ENST00000228827 TCTEX1D4Q5JR98 221 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 C5orf24Q7Z6I8 188 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 RBMXL1Q96E39 390 aaKnown RBP11.31□□□□□ -0.6
GPN3-201ENST00000228827 ANKRD60Q9BZ19 345 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
GPN3-201ENST00000228827 TCRBV4S1A1TA0A5B7 111 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 SC5DO75845 299 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 VSIG8P0DPA2 414 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 SRMP19623 302 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 IL3RAP26951 378 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 MAP2K4P45985 399 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 RPS25P62851 125 aaKnown RBP11.3□□□□□ -0.6
GPN3-201ENST00000228827 KHDC1LQ5JSQ8 128 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 GAPTQ8N292 157 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 OR4F17Q8NGA8 305 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 OR4X2Q8NGF9 303 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 PHYHIPQ92561 330 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 OR4F4Q96R69 305 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 VCX3BQ9H321 246 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 DUSP21Q9H596 190 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 TAF9BQ9HBM6 251 aa11.3□□□□□ -0.6
GPN3-201ENST00000228827 UCHL1P09936 223 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 UBBP0CG47 229 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 HTR2CP28335 458 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 ZNF134P52741 427 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 C1orf100Q5SVJ3 147 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 C8orf31Q8N9H6 132 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 MRPL30Q8TCC3 161 aaKnown RBP11.29□□□□□ -0.6
GPN3-201ENST00000228827 RTN4IP1Q8WWV3 396 aaPredicted RBP11.29□□□□□ -0.6
GPN3-201ENST00000228827 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 NEDD4LQ96PU5 975 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 SULT4A1Q9BR01 284 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 NICN1Q9BSH3 213 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
GPN3-201ENST00000228827 NCBP2LA6PVI3 153 aaKnown RBP11.28□□□□□ -0.6
GPN3-201ENST00000228827 CA11O75493 328 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
GPN3-201ENST00000228827 GLAP06280 429 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 PF4V1P10720 104 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 CRHBPP24387 322 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
GPN3-201ENST00000228827 GNMTQ14749 295 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 P2RY14Q15391 338 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
GPN3-201ENST00000228827 OXLD1Q5BKU9 147 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms