RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SPATA46Q5T0L3 261 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 STX12Q86Y82 276 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 ODF3L1Q8IXM7 274 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 KCNJ16Q9NPI9 418 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 CLCF1Q9UBD9 225 aa18.64■□□□□ 0.57
SMARCD2-201ENST00000225742 TMEM50AO95807 157 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 OR2H2O95918 312 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 OMGP23515 440 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 ASCL1P50553 236 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 TNFSF10P50591 281 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 PAX9P55771 341 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 FIP1L1Q6UN15 594 aaKnown RBP18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 WDR86Q86TI4 376 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 GPHA2Q96T91 129 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 MBNL3Q9NUK0 354 aaKnown RBP18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 AHCTF1Q8WYP5 2266 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 IGHV1-2P23083 117 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 RHEBQ15382 184 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 TESK1Q15569 626 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 RNF212Q495C1 297 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 LINC00518Q8N0U6 118 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 OR2J1Q9GZK6 312 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 UNKLQ9H9P5 680 aaKnown RBP18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 RPS10P5Q9NQ39 176 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 TRAPPC2LQ9UL33 140 aa18.63■□□□□ 0.57
SMARCD2-201ENST00000225742 PSG2P11465 335 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 TUBG1P23258 451 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 PPP1CCP36873 323 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 SULT1A1P50225 295 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 AWAT1Q58HT5 328 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 ATP1A1-AS1Q5TC04 95 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 TUBG2Q9NRH3 451 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 LIN7CQ9NUP9 197 aaKnown RBP18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 OR1A1Q9P1Q5 309 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 WSB1Q9Y6I7 421 aa18.62■□□□□ 0.57
SMARCD2-201ENST00000225742 C7orf77A4D0Y5 90 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 RNF212BA8MTL3 300 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 KIAA1324LA8MWY0 1029 aaPredicted RBP18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 SIRPB1O00241 398 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 TXNL1O43396 289 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 RAB2AP61019 212 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 OR51H1Q8NH63 302 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 IL1F10Q8WWZ1 152 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 KIAA1456Q9P272 454 aa18.61■□□□□ 0.57
SMARCD2-201ENST00000225742 CST7O76096 145 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 NXPH2O95156 264 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 HBE1P02100 147 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 CELA3BP08861 270 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 IDH3GP51553 393 aaPredicted RBP18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 TAS2R30P59541 319 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 SP5Q6BEB4 398 aaPredicted RBP18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 Q6ZT83 130 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 OR1J1Q8NGS3 322 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 RNASE11Q8TAA1 199 aaKnown RBP18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 SLC25A40Q8TBP6 338 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 RBFOX3A6NFN3 312 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 IGLV2-14P01704 120 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 MT-ND4LP03901 98 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 CBR1P16152 277 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 RAB5BP61020 215 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 TLE4Q04727 773 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 TRIP6Q15654 476 aaKnown RBP18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 AKR1C8PQ5T2L2 129 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 SPSB3Q6PJ21 355 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 FAM214BQ7L5A3 538 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 ZBTB34Q8NCN2 500 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 C14orf79Q96F83 325 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 FBXO7Q9Y3I1 522 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 R4GN57 208 aa18.6■□□□□ 0.57
SMARCD2-201ENST00000225742 ESPL1Q14674 2120 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 A0A0G2JRQ6 117 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 A0A1W2PR80 420 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 IFNA5P01569 189 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 ZNF154Q13106 437 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 GUSBP1Q15486 140 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 MYPOPQ86VE0 399 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 C1orf162Q8NEQ5 155 aaPredicted RBP18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 RBMXL1Q96E39 390 aaKnown RBP18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 CLCC1Q96S66 551 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 HES4Q9HCC6 221 aa18.59■□□□□ 0.57
SMARCD2-201ENST00000225742 M0R036 132 aa18.58■□□□□ 0.57
SMARCD2-201ENST00000225742 IFNA4P05014 189 aa18.58■□□□□ 0.57
SMARCD2-201ENST00000225742 SNRNP70P08621 437 aaKnown RBP18.58■□□□□ 0.57
SMARCD2-201ENST00000225742 EPHA1P21709 976 aa18.58■□□□□ 0.57
SMARCD2-201ENST00000225742 KCNIP1Q9NZI2 227 aa18.58■□□□□ 0.57
SMARCD2-201ENST00000225742 CDIPTO14735 213 aa18.58■□□□□ 0.56
SMARCD2-201ENST00000225742 SOHLH1Q5JUK2 328 aa18.58■□□□□ 0.56
SMARCD2-201ENST00000225742 TMEM217Q8N7C4 229 aa18.58■□□□□ 0.56
SMARCD2-201ENST00000225742 HIST1H2BAQ96A08 127 aa18.58■□□□□ 0.56
SMARCD2-201ENST00000225742 RBM7Q9Y580 266 aaKnown RBP18.58■□□□□ 0.56
SMARCD2-201ENST00000225742 TRAV1-1A0A0B4J248 108 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 TMEM30CPA0ZSE6 113 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 SYNGR2O43760 224 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 IGKV1-39P01597 117 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 IGKV1D-39P04432 117 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 PTAFRP25105 342 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 PSG7Q13046 419 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 MSMO1Q15800 293 aa18.57■□□□□ 0.56
SMARCD2-201ENST00000225742 TMPRSS7Q7RTY8 843 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms