RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 UBA52P62987 128 aaKnown RBP11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 NDNFQ8TB73 568 aa11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 TAF15Q92804 592 aaKnown RBP eCLIP11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 TAF9BQ9HBM6 251 aa11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
SUPT4H1-201ENST00000225504 METTL21EPA6NDL7 271 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 FBP1P09467 338 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 IER3P46695 156 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 KRTAP21-3Q3LHN1 58 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 ZNF880Q6PDB4 577 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 CLVS1Q8IUQ0 354 aaPredicted RBP11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 SLC25A46Q96AG3 418 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 MEGF9Q9H1U4 602 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 RHBDL2Q9NX52 303 aa11.66□□□□□ -0.54
SUPT4H1-201ENST00000225504 F2RL2O00254 374 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 SDCBPO00560 298 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 MFNGO00587 321 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 HIST1H1DP16402 221 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 GNG10P50151 68 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 RAB13P51153 203 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 SSX2Q16385 188 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 PLA1AQ53H76 456 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 C6orf183Q5T699 404 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 LDLRAD3Q86YD5 345 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 OR52L2PQ8NGH6 319 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 SETD6Q8TBK2 473 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 JMJD8Q96S16 334 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 CHMP1AQ9HD42 196 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 HILPDAQ9Y5L2 63 aa11.65□□□□□ -0.54
SUPT4H1-201ENST00000225504 J3QR06 171 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 TOR1AO14656 332 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 SPCS2Q15005 226 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 HMGN3Q15651 99 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 DTX3Q8N9I9 347 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 OR10V1Q8NGI7 309 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 PIFOQ8TCI5 191 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 SSX3Q99909 188 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 CMSS1Q9BQ75 279 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 CHIAQ9BZP6 476 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 DCSTAMPQ9H295 470 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 Q9N2K0 584 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 KCNIP1Q9NZI2 227 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 ABRACLQ9P1F3 81 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 SCOCQ9UIL1 159 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 SPATA2Q9UM82 520 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 TBL2Q9Y4P3 447 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 ETV7Q9Y603 341 aa11.64□□□□□ -0.55
SUPT4H1-201ENST00000225504 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 RNF212BA8MTL3 300 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 LY6LH3BQJ8 138 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 BUB1B-PAK6H3BSN5 160 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 TRIM77I1YAP6 450 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 SLC31A2O15432 143 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 SPINT2O43291 252 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 HTR1DP28221 377 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF134P52741 427 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 PRRX1P54821 245 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 SCAND1P57086 179 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 DIAPH2-AS1Q14236 149 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 GNMTQ14749 295 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 FAM189A2Q15884 450 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 IZUMO1Q8IYV9 350 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 OR52M1Q8NGK5 317 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 RIMS4Q9H426 269 aaPredicted RBP11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 DPM3Q9P2X0 92 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 CLDN34H7C241 214 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 SCTP09683 121 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 CD3GP09693 182 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 MINOS1Q5TGZ0 78 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 TRAT1Q6PIZ9 186 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF596Q8TC21 504 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 FAM216AQ8WUB2 273 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 SSMEM1Q8WWF3 244 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 MAFIPQ8WZ33 124 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 C19orf24Q9BVV8 132 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 C12orf4Q9NQ89 552 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 OR2S2Q9NQN1 319 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 MINOS1-NBL1R4GNA1 71 aa11.63□□□□□ -0.55
SUPT4H1-201ENST00000225504 TRAV18A0A075B6X5 111 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 H3BUX3 64 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 TMEM127O75204 238 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 PTHLHP12272 177 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 PPP1CCP36873 323 aaKnown RBP11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 RORCP51449 518 aa11.62□□□□□ -0.55
SUPT4H1-201ENST00000225504 TMBIM6P55061 237 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms