RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 IL22RA2Q969J5 263 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 TVP23CQ96ET8 276 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 CALHM2Q9HA72 323 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 TRAV20A0A0B4J274 112 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 SSPNQ14714 243 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 ELOBQ15370 118 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 ZNF674Q2M3X9 581 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 RDH5Q92781 318 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 RBMXL1Q96E39 390 aaKnown RBP14.73□□□□□ -0.05
USB1-201ENST00000219281 HIST1H2AAQ96QV6 131 aa14.73□□□□□ -0.05
USB1-201ENST00000219281 MRPS18CQ9Y3D5 142 aaKnown RBP14.73□□□□□ -0.05
USB1-201ENST00000219281 A0A087WWC5 75 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 RAB2AP61019 212 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 SLC25A24Q6NUK1 477 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 STX12Q86Y82 276 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 APOBEC3DQ96AK3 386 aaPredicted RBP14.72□□□□□ -0.05
USB1-201ENST00000219281 NIPSNAP3BQ9BS92 247 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 LINC00470Q9BZP3 86 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 IGKV3D-15A0A087WSY6 115 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 HBE1P02100 147 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 CELA3AP09093 270 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 PSG2P11465 335 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 HOXA5P20719 270 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 S100PP25815 95 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 NDUFA6P56556 154 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 ZNF324BQ6AW86 544 aaPredicted RBP14.72□□□□□ -0.05
USB1-201ENST00000219281 PSMF1Q92530 271 aa14.72□□□□□ -0.05
USB1-201ENST00000219281 ERRFI1Q9UJM3 462 aaPredicted RBP14.72□□□□□ -0.05
USB1-201ENST00000219281 SERPINE2P07093 398 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 ERVFRD-1P60508 538 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 OR8G1Q15617 311 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 DPPA3Q6W0C5 159 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 ZNF295-AS1Q8N0V1 137 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 OR5A2Q8NGI9 324 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 OR10J5Q8NHC4 309 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 STRADBQ9C0K7 418 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 FOXJ2Q9P0K8 574 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 OR2W1Q9Y3N9 320 aa14.71□□□□□ -0.05
USB1-201ENST00000219281 TGIF2-C20orf24A0A0A6YYL0 155 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 DFFBO76075 338 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 IFNA5P01569 189 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 S100GP29377 79 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 KHDC3LQ587J8 217 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 C17orf78Q8N4C9 275 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 RNASE11Q8TAA1 199 aaKnown RBP14.71□□□□□ -0.06
USB1-201ENST00000219281 EDARADDQ8WWZ3 215 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 ZPBPQ9BS86 351 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 TOLLIPQ9H0E2 274 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 RIMS4Q9H426 269 aaPredicted RBP14.71□□□□□ -0.06
USB1-201ENST00000219281 LRFN1Q9P244 771 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 GNG13Q9P2W3 67 aa14.71□□□□□ -0.06
USB1-201ENST00000219281 TRAV24A0A0B4J272 114 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 A0A1B0GU03 582 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 KIAA1324LA8MWY0 1029 aaPredicted RBP14.7□□□□□ -0.06
USB1-201ENST00000219281 LILRA1O75019 489 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 JMJD7P0C870 316 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 FAM209BQ5JX69 171 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 Q6ZRM9 215 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 IL1F10Q8WWZ1 152 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 RSG1Q9BU20 258 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 GGACTQ9BVM4 153 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 BOKQ9UMX3 212 aaPredicted RBP14.7□□□□□ -0.06
USB1-201ENST00000219281 R4GN57 208 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 DOCK10Q96BY6 2186 aa14.7□□□□□ -0.06
USB1-201ENST00000219281 LOC102723971A0A1B0GUV8 181 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 IFITM10A6NMD0 228 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 CD300LBA8K4G0 201 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 SERPINA7P05543 415 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 LHX2P50458 406 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 RNPS1Q15287 305 aaKnown RBP14.69□□□□□ -0.06
USB1-201ENST00000219281 H1FOOQ8IZA3 346 aaPredicted RBP14.69□□□□□ -0.06
USB1-201ENST00000219281 OR5P3Q8WZ94 311 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 LOXL4Q96JB6 756 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 DDA1Q9BW61 102 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 DOK5Q9P104 306 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 IGHV2-70P01814 119 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 GLIPR1P48060 266 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 HLA-DRB3P79483 266 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 IGFBP7Q16270 282 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 SLC35E3Q7Z769 313 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 ZNF610Q8N9Z0 462 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 OR51B6Q9H340 312 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 PLK3Q9H4B4 646 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 SIRT7Q9NRC8 400 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 OR1A1Q9P1Q5 309 aa14.69□□□□□ -0.06
USB1-201ENST00000219281 TRAV39A0A0B4J263 110 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 ARGFXA6NJG6 315 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 SS18L1O75177 396 aaPredicted RBP14.68□□□□□ -0.06
USB1-201ENST00000219281 CNOT4O95628 575 aaKnown RBP14.68□□□□□ -0.06
USB1-201ENST00000219281 COX5BP10606 129 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 IAPPP10997 89 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 CDX1P47902 265 aaPredicted RBP14.68□□□□□ -0.06
USB1-201ENST00000219281 GTF3AQ92664 365 aaKnown RBP14.68□□□□□ -0.06
USB1-201ENST00000219281 THOC3Q96J01 351 aaKnown RBP14.68□□□□□ -0.06
USB1-201ENST00000219281 POM121L2Q96KW2 1035 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 RAB40CQ96S21 281 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 HIPK2Q9H2X6 1198 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 VSIRQ9H7M9 311 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 TRBV23-1A0A0A0MS06 115 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 ZFP92A6NM28 416 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms