RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 KCNMB1Q16558 191 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 HIST3H3Q16695 136 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 BPIFA4PQ86YQ2 179 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 PGLYRP3Q96LB9 341 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 WDR13Q9H1Z4 485 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZNF552Q9H707 407 aaPredicted RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 GPR27Q9NS67 375 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 UQCR10Q9UDW1 63 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TMEM250H0YL14 139 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TCAPO15273 167 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 HBZP02008 142 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CDAP32320 146 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RAB9AP51151 201 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 UBE2L3P68036 154 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 LCN2P80188 198 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 GUCA2BQ16661 112 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 LHX8Q68G74 356 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR1L3Q8NH93 324 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MOB3AQ96BX8 217 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 SNX22Q96L94 193 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TUBA4BQ9H853 241 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 FLRT3Q9NZU0 649 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZNF318Q5VUA4 2279 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MKRN2OSH3BPM6 223 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 K7ESF4 209 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 EFSO43281 561 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 COX5BP10606 129 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 EPHA8P29322 1005 aaPredicted RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 GFERP55789 205 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RIPPLY2Q5TAB7 128 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 FAM78BQ5VT40 261 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CCDC144NLQ6NUI1 221 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TMEM37Q8WXS4 190 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ZCCHC14Q8WYQ9 949 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 IMMP2LQ96T52 175 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MRPL32Q9BYC8 188 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 CLN8Q9UBY8 286 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 ALPK2Q86TB3 2170 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 GOSR1O95249 250 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MELTFP08582 738 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR5AL1P0C617 328 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 SCGB1C2P0DMR2 95 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RLN3Q8WXF3 142 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 PKIBQ9C010 78 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RAB1BQ9H0U4 201 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 SOX21Q9Y651 276 aaPredicted RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 CBY3A6NI87 242 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 SRSF10O75494 262 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 GYPAP02724 150 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 MPZP25189 248 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 B2MP61769 119 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CEACAM21Q3KPI0 293 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 C10orf113Q5VZT2 155 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 EID2BQ96D98 161 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TMEM70Q9BUB7 260 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 A0A096LPE4 126 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 A0A1W2PPZ6 126 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RAB29O14966 203 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 CHST1O43916 411 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 LIFP15018 202 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 RPL29P47914 159 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 PPOXP50336 477 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 HIKESHIQ53FT3 197 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 PQLC2Q6ZP29 291 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 GCSAMQ8N6F7 178 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 TEX29Q8N6K0 151 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR2Z1Q8NG97 314 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR1L8Q8NGR8 309 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 DTD1Q8TEA8 209 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 SLC25A22Q9H936 323 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 KLK13Q9UKR3 277 aa3.87□□□□□ -1.79
CHD9-201ENST00000219084 PRRC2AP48634 2157 aaKnown RBP3.87□□□□□ -1.79
CHD9-201ENST00000219084 OR2M5A3KFT3 312 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 A8MWL6 223 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 B4E171 279 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SIAH2O43255 324 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 AMY1AP04745 511 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 DRD3P35462 400 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 OR3A1P47881 315 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 RPL11P62913 178 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 GP6Q9HCN6 339 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 KLF2Q9Y5W3 355 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 K7EQS6 105 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ITGBL1O95965 494 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 OR4A8P0C604 315 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 GLIPR1P48060 266 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FGF12P61328 243 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 CCL7P80098 99 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FMODQ06828 376 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 WDFY1Q8IWB7 410 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 OR2I1PQ8NGU4 316 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 OR5R1Q8NH85 324 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 NAGKQ9UJ70 344 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ING1Q9UK53 422 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 IGHV3-20A0A0C4DH32 117 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SYNGR1O43759 233 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 KLF7O75840 302 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 PPP1R17O96001 155 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 HNF1AP20823 631 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms