RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 KDF1Q8NAX2 398 aaPredicted RBP11.87□□□□□ -0.51
SIX4-201ENST00000216513 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 NINQ8N4C6 2090 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 F5H697 171 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 DXOO77932 396 aaKnown RBP11.87□□□□□ -0.51
SIX4-201ENST00000216513 ACOT6Q3I5F7 207 aaPredicted RBP11.87□□□□□ -0.51
SIX4-201ENST00000216513 TCEAL7Q9BRU2 100 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 RAB18Q9NP72 206 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
SIX4-201ENST00000216513 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 LILRB1Q8NHL6 650 aaPredicted RBP11.87□□□□□ -0.51
SIX4-201ENST00000216513 RPS4Y2Q8TD47 263 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 ASCL3Q9NQ33 180 aa11.87□□□□□ -0.51
SIX4-201ENST00000216513 PINLYPA6NC86 204 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 PPP1R2P9O14990 202 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 DEPPQ9NTK1 212 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 METTL1Q9UBP6 276 aaKnown RBP11.86□□□□□ -0.51
SIX4-201ENST00000216513 LYNX1G3V0Z9 82 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 OR5AC1P0C628 307 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 FABP4P15090 132 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 NSUN5P1Q3KNT7 163 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 PCSK4Q6UW60 755 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 CEACAM21Q3KPI0 293 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 RNFT1Q5M7Z0 435 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 RNF133Q8WVZ7 376 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 NPAP1Q9NZP6 1156 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 FRRS1LQ9P0K9 344 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 MGST3O14880 152 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.86□□□□□ -0.51
SIX4-201ENST00000216513 C1QBP02746 253 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 ERVS71-1P61550 626 aa11.86□□□□□ -0.51
SIX4-201ENST00000216513 H7BYZ3 331 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 ABHD12Q8N2K0 398 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 SLIRPQ9GZT3 109 aaKnown RBP11.85□□□□□ -0.51
SIX4-201ENST00000216513 KLHDC2Q9Y2U9 406 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 ZIC3O60481 467 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 LMX1BO60663 402 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 EFEMP2O95967 443 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 ASAH2BP0C7U1 165 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 IL19Q9UHD0 177 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 SPTBP11277 2137 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 RAB19A4D1S5 217 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 LALBAP00709 142 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 GLRXP35754 106 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 Q0VFX4 171 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 FAM122BQ7Z309 247 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 DBX1A6NMT0 343 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 SLC25A53Q5H9E4 307 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 FAM201AQ5SY85 155 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 ZCCHC24Q8N2G6 241 aaKnown RBP11.85□□□□□ -0.51
SIX4-201ENST00000216513 NEURL1O76050 574 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 THBDP07204 575 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 EFNB2P52799 333 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 IGLV3-21P80748 117 aaPredicted RBP11.85□□□□□ -0.51
SIX4-201ENST00000216513 RAB32Q13637 225 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 DUSP18Q8NEJ0 188 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 LEAP2Q969E1 77 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 RBM14Q96PK6 669 aaKnown RBP11.85□□□□□ -0.51
SIX4-201ENST00000216513 ABHD1Q96SE0 405 aa11.85□□□□□ -0.51
SIX4-201ENST00000216513 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
SIX4-201ENST00000216513 CTAG2O75638 210 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 GIPP09681 153 aaPredicted RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 BTNL8Q6UX41 500 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 ADAD2Q8NCV1 583 aaKnown RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 CDC34P49427 236 aaPredicted RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 TRAV1-2A0A0B4J238 106 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 MIDNQ504T8 468 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 CTDSP1Q9GZU7 261 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 PIKFYVEQ9Y2I7 2098 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 MPV17P39210 176 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 ZNF770Q6IQ21 691 aaPredicted RBP11.84□□□□□ -0.51
SIX4-201ENST00000216513 Q8WTZ3 238 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 DUX5Q96PT3 197 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 NIT2Q9NQR4 276 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 FBP1P09467 338 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 NRN1LQ496H8 165 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 C3orf56Q8N813 242 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 OR4X2Q8NGF9 303 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 OR4D10Q8NGI6 311 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
SIX4-201ENST00000216513 SYNGR1O43759 233 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 RAMP1O60894 148 aa11.83□□□□□ -0.52
SIX4-201ENST00000216513 FOXF2Q12947 444 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms