RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SERPINE2P07093 398 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 OTX2P32243 289 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 FGF12P61328 243 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 Q0VFX4 171 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 SLC35E3Q7Z769 313 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 OR8G5Q8NG78 346 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 OR2V1Q8NHB1 315 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 IFI44Q8TCB0 444 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 RBMXL1Q96E39 390 aaKnown RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 PRRC2CQ9Y520 2896 aaKnown RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 CLEC18AA5D8T8 446 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 CEBPZOSA8MTT3 80 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 TRAPPC2LH3BP13 241 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 GATCO43716 136 aaKnown RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 CEACAM1P13688 526 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 SRD5A2P31213 254 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 PCBD1P61457 104 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 RPS16P62249 146 aaKnown RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 BAXQ07812 192 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 HAPLN4Q86UW8 402 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 CLEC18CQ8NCF0 446 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 OR5D13Q8NGL4 314 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 WDR54Q9H977 334 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 LRFN1Q9P244 771 aa11.96□□□□□ -0.49
USH1C-201ENST00000005226 MRPS17Q9Y2R5 130 aaKnown RBP11.96□□□□□ -0.49
USH1C-201ENST00000005226 LRRC3CA6NJW4 275 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 FGF5P12034 268 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 SPEM1Q8N4L4 309 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 SNIP1Q8TAD8 396 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 M1APQ8TC57 530 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 MRPL30Q8TCC3 161 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 MEGF10Q96KG7 1140 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 SMOC1Q9H4F8 434 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 SIRT7Q9NRC8 400 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 ATP23Q9Y6H3 246 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 H0Y980 276 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 K7ESF4 209 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 HBE1P02100 147 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 RNF224P0DH78 156 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 GDF1P27539 372 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 MRPL21Q7Z2W9 205 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 SPSB4Q96A44 273 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 C14orf144Q96I85 54 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 ADGRG7Q96K78 797 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 DUSP23Q9BVJ7 150 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 REPIN1Q9BWE0 567 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 PLK3Q9H4B4 646 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 NBEAQ8NFP9 2946 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 A0A1B0GV90 55 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 OR5H1A6NKK0 313 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 BCL2P10415 239 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 CXCL12P48061 93 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 FOXO1Q12778 655 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 ZNF324BQ6AW86 544 aaPredicted RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 VASH2Q86V25 355 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 MKXQ8IYA7 352 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 CA5BP1Q8WTZ4 195 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 RCC1LQ96I51 464 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 ZNF391Q9UJN7 358 aa11.95□□□□□ -0.5
USH1C-201ENST00000005226 NOSIPQ9Y314 301 aaKnown RBP11.95□□□□□ -0.5
USH1C-201ENST00000005226 C9J4A7 227 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 RHBDL1O75783 438 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 CELA3AP09093 270 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 HIST1H1BP16401 226 aaKnown RBP11.94□□□□□ -0.5
USH1C-201ENST00000005226 CLN3Q13286 438 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 ZDHHC23Q8IYP9 409 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 OR14J1Q9UGF5 321 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 DNAJC13O75165 2243 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 AHCTF1Q8WYP5 2266 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 TRAV24A0A0B4J272 114 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 A0A1B0GU03 582 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 CLDN34H7C241 214 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 MRPL33O75394 65 aaKnown RBP11.94□□□□□ -0.5
USH1C-201ENST00000005226 TUBG1P23258 451 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 COL19A1Q14993 1142 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 SPANXN5Q5MJ07 72 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 ABLIM2Q6H8Q1 611 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 SPINK14Q6IE38 97 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 C1orf87Q8N0U7 546 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 OR2Y1Q8NGV0 311 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 CLDN23Q96B33 292 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 GFOD1Q9NXC2 390 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
USH1C-201ENST00000005226 KIR2DS1A0A191URI9 304 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 DFFBO76075 338 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 IGKV1-5P01602 117 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 CFIP05156 583 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 KIR2DS4P43632 304 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 LYSMD4Q5XG99 296 aa11.93□□□□□ -0.5
USH1C-201ENST00000005226 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
USH1C-201ENST00000005226 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms