RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Olfr721-ps1A0A140T8T9 324 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Smn1P97801 288 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r8Q8R2C2 303 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 A0A286YD13 301 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr66F8VQ01 311 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Gm20821J3QPJ2 227 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Cib3Q0P523 160 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Slc38a11Q3USY0 453 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 NppcQ61839 126 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Slc16a12Q8BGC3 486 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr786Q8VFH8 312 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr1201Q8VGF5 307 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rnaseh2cQ9CQ18 166 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Slc50a1Q9CXK4 221 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Tex33Q9D9J2 266 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Stard10Q9JMD3 291 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Csnk1eQ9JMK2 416 aaKnown RBP9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Trav5-1A0A075B5Z7 114 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Gm29776A0A286YEC0 699 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Gm4175D3YTW8 314 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r114L7N226 321 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r126L7N2C8 321 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 H2-M10.1O19443 331 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Mdh2P08249 338 aaKnown RBP9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rpusd3Q14AI6 344 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Itgb2lQ3UV74 738 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Bloc1s3Q5U5M8 195 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr10Q60883 311 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Sgo1Q9CXH7 517 aa9.39□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Nlgn4lB0F2B4 945 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 S1pr2P52592 352 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Lsm6P62313 80 aaKnown RBP9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Wbp2P97765 261 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 SryQ05738 395 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Zfp7Q3TFZ4 685 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ube2fbQ3UWQ3 185 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr988Q7TRA1 309 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Wfdc1Q9ESH5 211 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Tas2r105Q9JKT4 300 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 SigirrQ9JLZ8 409 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r170K7N6W9 304 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 AanatO88816 205 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 CapgP24452 352 aaKnown RBP9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Treml2Q2LA85 329 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Fbxw20Q5U467 468 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Reps2Q80XA6 521 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr702Q920Z2 318 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Bcorl1A2AQH4 1781 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ints1Q6P4S8 2195 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rpl7a-ps5A0A140T8L3 268 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Prrx1P63013 245 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr963Q7TRA9 311 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Sez6Q7TSK2 991 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Mob3cQ8BJG4 216 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr1143Q8VEU8 314 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr1459Q8VFV9 307 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 GmppaQ922H4 420 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Ms4a6dQ99N07 247 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Mid1ip1Q9CQ20 182 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Lhfpl5Q4KL25 219 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Fam234aQ8C0Z1 555 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Sectm1bQ9JL59 212 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 UcnP81615 122 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Lrrc61Q8R2R5 259 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr497Q8VG08 314 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr1294Q8VGE5 312 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr943Q9EQ92 314 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr715Q8VG49 315 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Fbxw25F7C9P2 466 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Susd5G3UW60 619 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 P01878 344 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Hoxc11P31313 304 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Hes1P35428 282 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Rpp21Q8R040 150 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Tnk1Q99ML2 666 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 PrkraQ9WTX2 313 aaKnown RBP9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 A630073D07RikE9PWS6 100 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Wdr25E9Q349 535 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Nipsnap1O55125 284 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 P01798 113 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Tmem167bQ80X45 74 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r183Q8K3N5 305 aa9.38□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Vmn1r177E9PXM3 309 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Cldn1O88551 211 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Adam12Q61824 903 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 AI987944Q7TPX5 406 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr504Q7TRU7 318 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Paqr8Q80ZE5 354 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Prr14lE9Q7C4 1971 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 TrdcA0A0G2JEU3 153 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Igkv12-46A0A140T8P6 115 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Zfp334A2A4U6 679 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 1700025C18RikA2A580 89 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Dtx4Q6PDK8 616 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 AplfQ9D842 499 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr1438-ps1A0A140LHS9 319 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Olfr196E9PYP4 309 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Zfp870J3QMA4 560 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Gm3486L7N2D0 199 aa9.37□□□□□ -0.91
Scn8a-201ENSMUST00000082209 Oprk1P33534 380 aa9.37□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms