RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Zfp97E9PZP6 546 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Vmn1r27K7N688 303 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Zfp960L7N267 546 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Gm3486L7N2D0 199 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 F7P70375 446 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Vmn1r195Q5SVD6 316 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr794Q8VF26 320 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr578Q8VH17 313 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Trip11E9Q512 1976 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 LipiF6YQT7 476 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Cpeb1P70166 561 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Tbpl2Q6SJ95 350 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Glrx5Q80Y14 152 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Vmn1r160E9Q346 307 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Vmn1r123L7N270 307 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Itln1O88310 313 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Ifna6P07350 189 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Hist1h1aP43275 213 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Chrna7P49582 502 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Abcd3P55096 659 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Fstl4Q5STE3 841 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 GcdhQ60759 438 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Zfp975Q6NVD6 525 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 CenpmQ9CQA0 180 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Nicn1Q9CQM0 213 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Glipr2Q9CYL5 154 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Csnk1eQ9JMK2 416 aaKnown RBP9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Scn1aA2APX8 2009 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Zfp870J3QMA4 560 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 P01915 264 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mc5rP41149 325 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Dhrs11Q3U0B3 260 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr142Q60881 305 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr1445Q8VFW9 314 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr50Q8VGK5 312 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Mpc2Q9D023 127 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 PrndQ9QUG3 179 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 ElobP62869 118 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Q3U6N9 222 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 OpalinQ7M750 143 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr967Q7TRA6 310 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Dhrs7cQ8CHS7 311 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Olfr262Q8VFV8 312 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Chrdl1Q920C1 447 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Ube2tQ9CQ37 204 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Samd8Q9DA37 478 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Enpp5Q9EQG7 477 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Cldn13Q9Z0S4 211 aa9.09□□□□□ -0.95
Ubr1-201ENSMUST00000028728 Gm765B2RVL9 189 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm20834J3QM72 227 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Vmn1r115K7N6Y3 295 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ear3O35290 156 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Usf1Q61069 310 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rbm38Q62176 237 aaKnown RBP9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 SordQ64442 357 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1238Q8VG59 315 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Vmn1r85Q8VIB8 308 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mrgpra6Q91ZC6 301 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Elovl1Q9JLJ5 279 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm13723A0A1L1SUP2 315 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1097A2AVA9 315 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Zbtb25G3UW50 439 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gfi1bO70237 330 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 KrasP32883 189 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 C1qaP98086 245 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Rnase11Q5GAM9 192 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 HrasQ61411 189 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr963Q7TRA9 311 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Mob3cQ8BJG4 216 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ube3dQ8BX13 368 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1262Q8VGN2 304 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Fitm1Q91V79 292 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Eva1aQ91WM6 156 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Abhd3Q91ZH7 411 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Nmnat3Q99JR6 245 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Vax2Q9WTP9 292 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Arfgef1G3X9K3 1846 aaKnown RBP9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Trav10nA0A075B622 114 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Trav10A0A075B642 114 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tmem235B1AQL3 211 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm11492Q5ND19 536 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 PiglQ5SX19 252 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm10334Q792Y8 246 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ergic1Q9DC16 290 aaKnown RBP9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Ndufaf3Q9JKL4 185 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Syt6Q9R0N8 511 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Prss47A0A0N4SVQ0 395 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Pet117P0DJF2 80 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Tnfrsf1aP25118 454 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr1341Q7TQV4 312 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 NtmQ99PJ0 344 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Urm1Q9D2P4 101 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Espl1P60330 2118 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gm29776A0A286YEC0 699 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Jmjd7P0C872 316 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Cxcl2P10889 100 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Gabrg2P22723 474 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Olfr15P23275 312 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Shc1P98083 579 aa9.08□□□□□ -0.96
Ubr1-201ENSMUST00000028728 Il17rcQ8K4C2 698 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 38.6 ms