RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr951Q9EQ94 314 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 MioxQ9QXN5 285 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Pde4dipQ80YT7 2224 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm6882J3KMT3 313 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm20834J3QM72 227 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 B3galt1O54904 326 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Amy1P00687 511 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Anxa7Q07076 463 aaKnown RBP14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm10662Q3UT86 313 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Foxl1Q64731 336 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 AI987944Q7TPX5 406 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Zfp955aQ80XR7 545 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 TecrlQ8BFZ1 361 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Dhrs7cQ8CHS7 311 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 WrbQ8K0D7 174 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Eddm3bQ8K0E4 149 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr974Q8VH09 310 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Cep41Q99NF3 373 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Emc9Q9DB76 206 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 BlnkQ9QUN3 457 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 TpbgQ9Z0L0 426 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm17655A0A1B0GT13 591 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Igsf11P0C673 428 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Meox2P32443 303 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 LumP51885 338 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 ElobP62869 118 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Smad4P97471 551 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Rnf150Q5DTZ6 437 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Taar6Q5QD13 345 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 RflnaQ7TS73 204 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Tmem234Q8R1E7 140 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1393Q8VFA7 311 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1411Q8VFC4 323 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1459Q8VFV9 307 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Rfpl4aQ8VH31 287 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Lysmd2Q9D7V2 215 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Fbxw4Q9JMJ2 410 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 SrpxQ9R0M3 464 aa14.37□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr721-ps1A0A140T8T9 324 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1291-ps1A0A286YE47 326 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Arg2O08691 354 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Sh2d1bO35324 132 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 SgceO70258 437 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 MgmtP26187 211 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Dnase1P49183 284 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 ElnP54320 860 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Tcl1aP56280 116 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Ascl1Q02067 231 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Slc22a26Q91WJ2 552 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Eva1aQ91WM6 156 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 9330161L09RikQ9D253 136 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Samd8Q9DA37 478 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr957Q9EQB7 311 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm14403A2BFU4 402 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Mn1D3YWE6 1297 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm21783J3QM57 227 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr628K7N6B2 316 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Cd200O54901 278 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Hprt1P00493 218 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Sult1c1Q80VR3 304 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Lpar6Q8BMC0 344 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Arf2Q8BSL7 181 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Spem2Q8C5U4 503 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr1280Q8VGG8 305 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Tmem205Q91XE8 189 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Dmxl1Q6PNC0 3013 aa14.36□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm38303A0A0A6YWW8 100 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Tex38A2A8T7 201 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm8225D3Z536 292 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr225E9PWF9 419 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr432E9Q8M2 312 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Gm8024L7N2E0 100 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Gpr33O88416 339 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 NppaP05125 152 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 CtseP70269 397 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Trav8d-2Q5R1B6 112 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Vmn1r223Q5SSA0 361 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 GcdhQ60759 438 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 BtlaQ7TSA3 306 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Gpr89aQ8BS95 455 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Elp5Q99L85 300 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 PecrQ99MZ7 303 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Asb5Q9D1A4 329 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 CutcQ9D8X1 272 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Enpp5Q9EQG7 477 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Pkd1l3Q2EG98 2201 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr248E9Q1L6 309 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr554E9Q546 317 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Mdh2P08249 338 aaKnown RBP14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Itga5P11688 1053 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Htr2aP35363 471 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Rpl12P35979 165 aaKnown RBP14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Tmem71Q149F5 287 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Ceacam12Q3UKP4 300 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 SelenohQ3UQA7 116 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Pate2Q3UW31 111 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Tas2r120Q7M721 295 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Olfr453Q7TRV7 317 aa14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Znf385aQ8VD12 386 aaKnown RBP14.35□□□□□ -0.11
Shh-201ENSMUST00000002708 Tmem33Q9CR67 247 aa14.35□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms