RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	UBB	P0CG47	229 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	CPE	P16870	476 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	PSMA1	P25786	263 aa	Known RBP	12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	SSTR5	P35346	364 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	MAP2K4	P45985	399 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	ARHGDIB	P52566	201 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	UTF1	Q5T230	341 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	CCBE1	Q6UXH8	406 aa	Predicted RBP	12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	ZNF497	Q6ZNH5	498 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	TMEM219	Q86XT9	240 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	DTX3	Q8N9I9	347 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	OR10A7	Q8NGE5	316 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	OR9G1	Q8NH87	305 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939		Q96M66	194 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	MGLL	Q99685	303 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	CST11	Q9H112	138 aa		12.1	□□□□□ -0.47
PHGDH-231	ENST00000641939	VWF	P04275	2813 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	LY6L	H3BQJ8	138 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939		H3BUI4	141 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939		J3QR06	171 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	AIP	O00170	330 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	MT-ND4	P03905	459 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	BRS3	P32247	399 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	RPS25	P62851	125 aa	Known RBP	12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	TBCE	Q15813	527 aa	Predicted RBP	12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	LTC4S	Q16873	150 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	C1orf100	Q5SVJ3	147 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	TPTE2P1	Q5T6R2	138 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	RAB12	Q6IQ22	244 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	TMEM91	Q6ZNR0	172 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	SLC16A12	Q6ZSM3	486 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	OR2T6	Q8NHC8	308 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	CCDC107	Q8WV48	283 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	FAM46B	Q96A09	425 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	MMP28	Q9H239	520 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	ETAA1	Q9NY74	926 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	SIGLEC9	Q9Y336	463 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	PEX16	Q9Y5Y5	336 aa		12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	TET2	Q6N021	2002 aa	Predicted RBP	12.09	□□□□□ -0.47
PHGDH-231	ENST00000641939	C15orf65	H3BRN8	121 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	GLA	P06280	429 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	CD37	P11049	281 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	FUT3	P21217	361 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	EFNB2	P52799	333 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	C11orf88	Q6PI97	169 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	ZNF367	Q7RTV3	350 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	LEAP2	Q969E1	77 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	ARL11	Q969Q4	196 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939		Q9H521	79 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	PSG11	Q9UQ72	335 aa		12.08	□□□□□ -0.48
PHGDH-231	ENST00000641939	OOSP1	A8MZH6	123 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	TIMM23	O14925	209 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	SLC22A1	O15245	554 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	ORC5	O43913	435 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	PDCD6	O75340	191 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	CA11	O75493	328 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	ARL6IP5	O75915	188 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	MPIG6B	O95866	241 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	IGHV3-7	P01780	117 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	VSIG8	P0DPA2	414 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	HTR2C	P28335	458 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	GABARAPL2	P60520	117 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	SIGIRR	Q6IA17	410 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR10K2	Q6IF99	312 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	CCDC144NL	Q6NUI1	221 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	GAPT	Q8N292	157 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR52M1	Q8NGK5	317 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	KCNG3	Q8TAE7	436 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	ZNF702P	Q9H963	129 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	ACOT13	Q9NPJ3	140 aa		12.07	□□□□□ -0.48
PHGDH-231	ENST00000641939	UBE2QL1	A1L167	161 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	DENR	O43583	198 aa	Known RBP	12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	MRPS14	O60783	128 aa	Known RBP	12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	BPNT1	O95861	308 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	CD24	P25063	80 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	MNDA	P41218	407 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	GNG10	P50151	68 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	FABP5	Q01469	135 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	C6orf183	Q5T699	404 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	SYT6	Q5T7P8	510 aa	Predicted RBP	12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	C16orf82	Q7Z2V1	217 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939		Q8N2B8	174 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR6M1	Q8NGM8	313 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	OR4K15	Q8NH41	348 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	TOMM40L	Q969M1	308 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	RPE	Q96AT9	228 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	TMEM59	Q9BXS4	323 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	PRSS22	Q9GZN4	317 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939	TRAPPC2L	Q9UL33	140 aa		12.06	□□□□□ -0.48
PHGDH-231	ENST00000641939		M0QZ24	198 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	SDCBP	O00560	298 aa	Predicted RBP	12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	SLC17A2	O00624	439 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	SPINT2	O43291	252 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	CALR	P27797	417 aa	Known RBP	12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	RPS27A	P62979	156 aa	Known RBP	12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	EMX1	Q04741	257 aa	Predicted RBP	12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	UNC119	Q13432	240 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	MADCAM1	Q13477	382 aa		12.05	□□□□□ -0.48
PHGDH-231	ENST00000641939	SSX1	Q16384	188 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms