RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 FBLN5Q9UBX5 448 aa6.03□□□□□ -1.44
PHGDH-225ENST00000641720 GLS2Q9UI32 602 aa6.03□□□□□ -1.44
PHGDH-225ENST00000641720 CEPT1Q9Y6K0 416 aa6.03□□□□□ -1.44
PHGDH-225ENST00000641720 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 TRAV39A0A0B4J263 110 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 KIR2DS1A0A191URI9 304 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 A0A1W2PQ09 198 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A10PA6NDY2 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A18PA6NE21 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A16PA6NEW6 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A20PA6NIJ5 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A8PA6NJQ4 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A7PA6NKC0 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A22PA8MWA6 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A12PA8MX19 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A5PA8MXJ8 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A23PA8MXZ1 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 MGST3O14880 152 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 GPR137BO60478 399 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 PDCD6O75340 191 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 CSN2P05814 226 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A15PP0C7V4 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A13PP0C7W8 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A14PP0C7W9 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 FAM90A24PP0C7X0 464 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 CCL3L1P16619 93 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 GLIPR1P48060 266 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 PSMD7P51665 324 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 TMBIM6P55061 237 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 DLX6P56179 175 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 EDDM3BP56851 147 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 RPL31P62899 125 aaKnown RBP6.02□□□□□ -1.45
PHGDH-225ENST00000641720 AESQ08117 197 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 BLMHQ13867 455 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 MOGAT2Q3SYC2 334 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 NKAPLQ5M9Q1 402 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 VAX1Q5SQQ9 334 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 ATAD3CQ5T2N8 411 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 IDNKQ5T6J7 187 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 RSBN1Q5VWQ0 802 aaPredicted RBP6.02□□□□□ -1.45
PHGDH-225ENST00000641720 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 TMEM200BQ69YZ2 307 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 RAB12Q6IQ22 244 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 CFAP161Q6P656 301 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 GDPD3Q7L5L3 318 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 LDLRAD3Q86YD5 345 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 Q8N7P7 452 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 RAB2BQ8WUD1 216 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 TBX15Q96SF7 602 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 SULT4A1Q9BR01 284 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 MRI1Q9BV20 369 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 SIRPDQ9H106 197 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 DCSTAMPQ9H295 470 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 PCDHB16Q9NRJ7 776 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 AURKAIP1Q9NWT8 199 aaPredicted RBP6.02□□□□□ -1.45
PHGDH-225ENST00000641720 ONECUT1Q9UBC0 465 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 KIF25Q9UIL4 384 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 POMT1Q9Y6A1 747 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 HERC2O95714 4834 aa6.02□□□□□ -1.45
PHGDH-225ENST00000641720 ODAMA1E959 279 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 UBE2QL1A1L167 161 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 SOCS1O15524 211 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 TSPAN9O75954 239 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 ECDO95905 644 aaPredicted RBP6.01□□□□□ -1.45
PHGDH-225ENST00000641720 LIPFP07098 398 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 RAB6AP20340 208 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 FUT3P21217 361 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 VEGFCP49767 419 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 ERVFRD-1P60508 538 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 ARF6P62330 175 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 C21orf62-AS1Q17RA5 79 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 PLAC9Q5JTB6 97 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 KRBOX4Q5JUW0 171 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 BTNL3Q6UXE8 466 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 ZNF497Q6ZNH5 498 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 REC114Q7Z4M0 266 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 C6orf201Q7Z4U5 140 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 OR13A1Q8NGR1 328 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 NEK7Q8TDX7 302 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 CFHR4Q92496 578 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 HDHD3Q9BSH5 251 aaPredicted RBP6.01□□□□□ -1.45
PHGDH-225ENST00000641720 SIRT7Q9NRC8 400 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 RHBDL2Q9NX52 303 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 RAB22AQ9UL26 194 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 PEX16Q9Y5Y5 336 aa6.01□□□□□ -1.45
PHGDH-225ENST00000641720 ALMS1Q8TCU4 4167 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 CENPVL3A0A0U1RRI6 287 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 TMEM30CPA0ZSE6 113 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 ADARB2-AS1A8MUL3 147 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 K7EIL1 84 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 RAB27BO00194 218 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 MFNGO00587 321 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 MMP23AO75900 390 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 IGHV4-59P01825 116 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 ERP29P30040 261 aaKnown RBP6□□□□□ -1.45
PHGDH-225ENST00000641720 BLVRBP30043 206 aaPredicted RBP6□□□□□ -1.45
PHGDH-225ENST00000641720 SSTR5P35346 364 aa6□□□□□ -1.45
PHGDH-225ENST00000641720 GDNFP39905 211 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms