RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 HMGA2P52926 109 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 SMIM11AP58511 58 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 ROM1Q03395 351 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 ATXN7L3Q14CW9 347 aaPredicted RBP6.06□□□□□ -1.44
SCARB2-226ENST00000640916 CDK5R1Q15078 307 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 METTL21CQ5VZV1 264 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 WDR93Q6P2C0 686 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 SLC16A12Q6ZSM3 486 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 Q8IYB0 196 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 ELMOD2Q8IZ81 293 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 Q8N402 240 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 LINC00311Q8N616 119 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 OR51T1Q8NGJ9 327 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 FAM162AQ96A26 154 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 OR51V1Q9H2C8 321 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 PLEKHA1Q9HB21 404 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 EXOSC4Q9NPD3 245 aaKnown RBP6.06□□□□□ -1.44
SCARB2-226ENST00000640916 PARP11Q9NR21 331 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 GID8Q9NWU2 228 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 BAIAP2Q9UQB8 552 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 MYRFQ9Y2G1 1151 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 GSTK1Q9Y2Q3 226 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 NUBP2Q9Y5Y2 271 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
SCARB2-226ENST00000640916 TRAV39A0A0B4J263 110 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 IGKV1-9A0A0C4DH69 117 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 RIIAD1A6NNX1 92 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 OR11H12B2RN74 326 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 GSTA4O15217 222 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SLC31A2O15432 143 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SOX14O95416 240 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF3P17036 446 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 CCL1P22362 96 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SSTR5P35346 364 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 GLP1RP43220 463 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 FUT6P51993 359 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SYNJ2BPP57105 145 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SF3A3Q12874 501 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCARB2-226ENST00000640916 OR2T33Q8NG76 320 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 OR10A7Q8NGE5 316 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 RP9Q8TA86 221 aaKnown RBP6.05□□□□□ -1.44
SCARB2-226ENST00000640916 ANKRD60Q9BZ19 345 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 NCOR1P1Q9H4R4 102 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 SLC25A19Q9HC21 320 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 INTS9Q9NV88 658 aaKnown RBP6.05□□□□□ -1.44
SCARB2-226ENST00000640916 ETAA1Q9NY74 926 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 KIF25Q9UIL4 384 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 COPS3Q9UNS2 423 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 FOXA2Q9Y261 457 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-226ENST00000640916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-226ENST00000640916 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
SCARB2-226ENST00000640916 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MAGEB4O15481 346 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-226ENST00000640916 E2F6O75461 281 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 IFNGP01579 166 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 SLC2A5P22732 501 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF137PP52743 207 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF45Q02386 682 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 SCN1BQ07699 218 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 BNIP1Q12981 228 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 DYRK1AQ13627 763 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MMDQ15546 238 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 ECSCRQ19T08 205 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 LRRC36Q1X8D7 754 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 CD300EQ496F6 205 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-226ENST00000640916 SAMD4BQ5PRF9 694 aaKnown RBP6.04□□□□□ -1.44
SCARB2-226ENST00000640916 RSBN1Q5VWQ0 802 aaPredicted RBP6.04□□□□□ -1.44
SCARB2-226ENST00000640916 PLEKHG7Q6ZR37 379 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF679Q8IYX0 411 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 IQCF1Q8N6M8 205 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 C8orf31Q8N9H6 132 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF565Q8N9K5 539 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 BBS1Q8NFJ9 593 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 PLPPR1Q8TBJ4 325 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MRGPRDQ8TDS7 321 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 OTULINQ96BN8 352 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 RCN3Q96D15 328 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MS4A10Q96PG2 267 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MROQ9BYG7 248 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 TTTY10Q9BZA0 68 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 CHST5Q9GZS9 411 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 SLC23A1Q9UHI7 598 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 LAMP5Q9UJQ1 280 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 OR52A1Q9UKL2 312 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 AP3M1Q9Y2T2 418 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 V9GYQ6 96 aa6.04□□□□□ -1.44
SCARB2-226ENST00000640916 MEIKINA0A087WXM9 373 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 TRAV24A0A0B4J272 114 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ANKRD34BA5PLL1 514 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 C15orf65H3BRN8 121 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF254O75437 659 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 KDM4BO94953 1096 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF44P15621 663 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ZP3P21754 424 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 C21orf33P30042 268 aaPredicted RBP6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ALDH3A2P51648 485 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 ZNF134P52741 427 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 PDZK1IP1Q13113 114 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 LSAMPQ13449 338 aa6.03□□□□□ -1.44
SCARB2-226ENST00000640916 C5orf64Q2M2E5 130 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms