RNA–Protein interactions for RNA: ENST00000640431.1

PAX6-271, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-271ENST00000640431 TBC1D26Q86UD7 250 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 DEFB127Q9H1M4 99 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 KLF13Q9Y2Y9 288 aaPredicted RBP13.06□□□□□ -0.32
PAX6-271ENST00000640431 FLNCQ14315 2725 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 NAPSAO96009 420 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 SCTP09683 121 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 PRKACAP17612 351 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 CAMLGP49069 296 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 PLGLB1Q02325 96 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 GNMTQ14749 295 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 HERPUD1Q15011 391 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 PEA15Q15121 130 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 ZNF818PQ6ZRF7 136 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 BOD1Q96IK1 185 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 FAM173AQ9BQD7 235 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 C19orf12Q9NSK7 152 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
PAX6-271ENST00000640431 COLCA2A8K830 154 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 LINC01387J3KSC0 135 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 LMO1P25800 156 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 ASCL1P50553 236 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 EWSR1Q01844 656 aaKnown RBP eCLIP13.05□□□□□ -0.32
PAX6-271ENST00000640431 GUK1Q16774 197 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 AKIRIN2Q53H80 203 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 AVPI1Q5T686 147 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 MRPL21Q7Z2W9 205 aaKnown RBP13.05□□□□□ -0.32
PAX6-271ENST00000640431 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 ZDHHC23Q8IYP9 409 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SAXO1Q8IYX7 474 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 COMMD1Q8N668 190 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 TMEM251Q8N6I4 163 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 TMEM56Q96MV1 263 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 MTCH1Q9NZJ7 389 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 TMEM56-RWDD3S4R434 201 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 ZGRF1Q86YA3 2104 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 IGKV1D-13A0A0B4J2D9 117 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 HSPB6O14558 160 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 CDS2O95674 445 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 IGKV1-13P0DP09 117 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SFTPCP11686 197 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SRPXP78539 464 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 IGFBP7Q16270 282 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SRSF7Q16629 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
PAX6-271ENST00000640431 CEACAM21Q3KPI0 293 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SPIN3Q5JUX0 258 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 SELENOHQ8IZQ5 122 aaKnown RBP13.05□□□□□ -0.32
PAX6-271ENST00000640431 GPHA2Q96T91 129 aa13.05□□□□□ -0.32
PAX6-271ENST00000640431 FAM24AA6NFZ4 105 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 ZNF732B4DXR9 585 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 KLRC4-KLRK1H3BQV0 150 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 SS18L1O75177 396 aaPredicted RBP13.04□□□□□ -0.32
PAX6-271ENST00000640431 TK1P04183 234 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 AKR1C3P42330 323 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 RND3P61587 244 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 TSC22D1Q15714 1073 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 ZNF695Q8IW36 515 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 ZFP82Q8N141 532 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 GAPTQ8N292 157 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 OR2C3Q8N628 320 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 ZFP62Q8NB50 900 aaPredicted RBP13.04□□□□□ -0.32
PAX6-271ENST00000640431 ESRP2Q9H6T0 727 aaKnown RBP13.04□□□□□ -0.32
PAX6-271ENST00000640431 SMCO4Q9NRQ5 59 aa13.04□□□□□ -0.32
PAX6-271ENST00000640431 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
PAX6-271ENST00000640431 STRAPQ9Y3F4 350 aaKnown RBP13.04□□□□□ -0.32
PAX6-271ENST00000640431 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 IGSF23A1L1A6 192 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 SLC22A20A6NK97 555 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 NGFP01138 241 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 PRH1P02810 166 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 COX5BP10606 129 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 RPL35P42766 123 aaKnown RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 HOXA1P49639 335 aaPredicted RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 RAB5CP51148 216 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 POLR2GP62487 172 aaKnown RBP eCLIP13.03□□□□□ -0.32
PAX6-271ENST00000640431 HMGN3Q15651 99 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 TMEM182Q6ZP80 229 aaPredicted RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 LILRB1Q8NHL6 650 aaPredicted RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 C2CD4CQ8TF44 421 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 APOBEC3DQ96AK3 386 aaPredicted RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 IGKV1-6A0A0C4DH72 117 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 TUSC2O75896 110 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 ZNF565Q8N9K5 539 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 CLCC1Q96S66 551 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 EIF5A2Q9GZV4 153 aaKnown RBP13.03□□□□□ -0.32
PAX6-271ENST00000640431 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 BIN3Q9NQY0 253 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 RFNGQ9Y644 331 aa13.03□□□□□ -0.32
PAX6-271ENST00000640431 TRAPPC2LH3BP13 241 aa13.02□□□□□ -0.33
PAX6-271ENST00000640431 K7N7A8 449 aa13.02□□□□□ -0.33
PAX6-271ENST00000640431 HSD17B6O14756 317 aa13.02□□□□□ -0.33
PAX6-271ENST00000640431 ADAM20O43506 726 aa13.02□□□□□ -0.33
PAX6-271ENST00000640431 SYNGR1O43759 233 aa13.02□□□□□ -0.33
PAX6-271ENST00000640431 SYNGR4O95473 234 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms