RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 TRBV23-1A0A0A0MS06 115 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 A0A1W2PPE3 182 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 PTBP3O95758 552 aaKnown RBP12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 VSIG8P0DPA2 414 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 COL10A1Q03692 680 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 OR1K1Q8NGR3 316 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 CLN8Q9UBY8 286 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 PSG2P11465 335 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 REG1BP48304 166 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 OR4A4PQ8NGN8 299 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 SCMH1Q96GD3 660 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 CHST5Q9GZS9 411 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 PRNDQ9UKY0 176 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 SEMA7AO75326 666 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 C8orf82Q6P1X6 216 aaPredicted RBP12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 RBPMS2Q6ZRY4 209 aaKnown RBP12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 ZPLD1Q8TCW7 415 aa12.86□□□□□ -0.35
HNRNPU-226ENST00000640218 CD40P25942 277 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 PLPPR5Q32ZL2 321 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 OR4D10Q8NGI6 311 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 ZNF488Q96MN9 340 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 SEC11CQ9BY50 192 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 IGHV3-21A0A0B4J1V1 117 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 ARG1P05089 322 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 RPL7P18124 248 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 IL11P20809 199 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 WFDC3Q8IUB2 231 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 OR8I2Q8N0Y5 310 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 GPA33Q99795 319 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 MRPS18BQ9Y676 258 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 M0R2Z0 102 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 PRSS1P07477 247 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 CELA2AP08217 269 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 TMEM183BQ1AE95 376 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 OR10G8Q8NGN5 311 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 PCGF1Q9BSM1 259 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 SLC25A10Q9UBX3 287 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 UPK3AO75631 287 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 EFNB2P52799 333 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 RNF224P0DH78 156 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 ANGPTL6Q8NI99 470 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 PRO1933Q9H354 126 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 Q9N2K0 584 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 VSIG4Q9Y279 399 aa12.85□□□□□ -0.35
HNRNPU-226ENST00000640218 P01737 135 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 EWSR1Q01844 656 aaKnown RBP eCLIP12.84□□□□□ -0.351e-8■■■■□ 22.3
HNRNPU-226ENST00000640218 MESP2Q0VG99 397 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 ZNF501Q96CX3 271 aaPredicted RBP12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 LINC00052Q96N35 136 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 SYNGR1O43759 233 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 SLC22A18ASQ8N1D0 253 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 ADAMTS17Q8TE56 1095 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 PLXNB2O15031 1838 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 CD300CQ08708 224 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 PRSS50Q9UI38 385 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 KLHDC2Q9Y2U9 406 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 FAM157CP0CG43 387 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 COL8A1P27658 744 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 DOLPP1Q86YN1 238 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 OR11H7Q8NGC8 314 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 ZNHIT1O43257 154 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 TMEM50BP56557 158 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 C1orf185Q5T7R7 199 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 A0A0J9YW62 118 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 IGF2P01344 180 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 PPP1CCP36873 323 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 OR10C1Q96KK4 312 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 PGLYRP3Q96LB9 341 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 DLEC1Q9Y238 1755 aa12.84□□□□□ -0.35
HNRNPU-226ENST00000640218 AWAT1Q58HT5 328 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 PMS2CLQ68D20 193 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 MFNGO00587 321 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 C1QCP02747 245 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 WNT5AP41221 380 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 MMDQ15546 238 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 SLC35E3Q7Z769 313 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 PERPQ96FX8 193 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 RCC2Q9P258 522 aaKnown RBP12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 VAX2Q9UIW0 290 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.36
HNRNPU-226ENST00000640218 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms