RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 UNQ9370/PRO34162Q6UXP9 181 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 SLC16A12Q6ZSM3 486 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 C16orf82Q7Z2V1 217 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 CEACAM19Q7Z692 300 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 FAM110DQ8TAY7 271 aaPredicted RBP11.08□□□□□ -0.64
PNKP-228ENST00000637325 SGCDQ92629 289 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 TOMM40LQ969M1 308 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 ARL11Q969Q4 196 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 ETAA1Q9NY74 926 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 PSG11Q9UQ72 335 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 PEX16Q9Y5Y5 336 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 VWFP04275 2813 aa11.08□□□□□ -0.64
PNKP-228ENST00000637325 LY6LH3BQJ8 138 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 MT-ND4P03905 459 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 VDAC2P45880 294 aaPredicted RBP11.07□□□□□ -0.64
PNKP-228ENST00000637325 HSPA13P48723 471 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 BLCAPP62952 87 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 MADCAM1Q13477 382 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 GPR50Q13585 617 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 INSL4Q14641 139 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 GLT8D1Q68CQ7 371 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 IZUMO2Q6UXV1 221 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 ZNF497Q6ZNH5 498 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 Q8N2B8 174 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 OR10X1Q8NGY0 326 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 SLC25A33Q9BSK2 321 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 ANKRD60Q9BZ19 345 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 CST11Q9H112 138 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 LIN7BQ9HAP6 207 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 RAB9BQ9NP90 201 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 GHRLQ9UBU3 117 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 TRAPPC2LQ9UL33 140 aa11.07□□□□□ -0.64
PNKP-228ENST00000637325 LSM2Q9Y333 95 aaKnown RBP11.07□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A10PA6NDY2 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A18PA6NE21 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A16PA6NEW6 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A20PA6NIJ5 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A7PA6NKC0 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A12PA8MX19 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A5PA8MXJ8 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A23PA8MXZ1 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 SDCBPO00560 298 aaPredicted RBP11.06□□□□□ -0.64
PNKP-228ENST00000637325 ORC5O43913 435 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FBXO24O75426 580 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 TSPAN15O95858 294 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A15PP0C7V4 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A13PP0C7W8 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A14PP0C7W9 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM90A24PP0C7X0 464 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 UBBP0CG47 229 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM106CPP0CH98 169 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 SRMP19623 302 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FUT3P21217 361 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 IRF3Q14653 427 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM27D1Q5T7N8 215 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 LIPKQ5VXJ0 399 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 TMEM104Q8NE00 496 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 UBALD1Q8TB05 177 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 PHYHIPQ92561 330 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 TMEM203Q969S6 136 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 FAM46BQ96A09 425 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 CNBD2Q96M20 576 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 DUSP21Q9H596 190 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 SERTAD4Q9NUC0 356 aa11.06□□□□□ -0.64
PNKP-228ENST00000637325 RCC2Q9P258 522 aaKnown RBP11.06□□□□□ -0.64
PNKP-228ENST00000637325 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 A0A1W2PPE3 182 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 UBE2QL1A1L167 161 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 SPINT2O43291 252 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 OR2F2O95006 317 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 MPIG6BO95866 241 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 VHLP40337 213 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 RAB7AP51149 207 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 C6orf183Q5T699 404 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
PNKP-228ENST00000637325 HIST2H2BDQ6DRA6 164 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 Q6ZS46 218 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 LRRTM1Q86UE6 522 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 LYPD6Q86Y78 171 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 OR52M1Q8NGK5 317 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 OR4K15Q8NH41 348 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 CFHR4Q92496 578 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 Q96M66 194 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 RBM14Q96PK6 669 aaKnown RBP11.05□□□□□ -0.64
PNKP-228ENST00000637325 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
PNKP-228ENST00000637325 IGHV3-43A0A0B4J1X8 118 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 C15orf65H3BRN8 121 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 CA11O75493 328 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 GLAP06280 429 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 IGHV3-43DP0DP04 118 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 CRHBPP24387 322 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 IL3RAP26951 378 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 GP2P55259 537 aaKnown RBP11.04□□□□□ -0.64
PNKP-228ENST00000637325 HES1Q14469 280 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 TRAM1Q15629 374 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 NSUN5P1Q3KNT7 163 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
PNKP-228ENST00000637325 ABCA11PQ4W5N1 156 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms