RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	PGPEP1	Q9NXJ5	209 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	BABAM2	Q9NXR7	383 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IDI2-AS1	Q9NZ38	188 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IL36G	Q9NZH8	169 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PSG11	Q9UQ72	335 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ST3GAL6	Q9Y274	331 aa		5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.81	□□□□□ -1.48
CACNA1A-222	ENST00000636022	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TRAV39	A0A0B4J263	110 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GEMIN2	O14893	280 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PFDN1	O60925	122 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GPX5	O75715	221 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CDRT1	O95170	752 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGHV3-7	P01780	117 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CD2	P06729	351 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SNRNP70	P08621	437 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SNRPB	P14678	240 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGFBP3	P17936	291 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DCK	P27707	260 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SSTR5	P35346	364 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF93	P35789	620 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RBM11	P57052	281 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LOXL3	P58215	753 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RPS11	P62280	158 aa	Known RBP eCLIP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MADCAM1	Q13477	382 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DMKN	Q6E0U4	476 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OSR2	Q8N2R0	312 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SUMF2	Q8NBJ7	301 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR52N1	Q8NH53	320 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR56B4	Q8NH76	319 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MRGPRD	Q8TDS7	321 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SGCD	Q92629	289 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TOMM40L	Q969M1	308 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM106A	Q96A25	262 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RPE	Q96AT9	228 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ORAI1	Q96D31	301 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SMIM19	Q96E16	107 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RDH12	Q96NR8	316 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GPER1	Q99527	375 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	METTL9	Q9H1A3	318 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM138	Q9NPI0	162 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PCDHB16	Q9NRJ7	776 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SMPD3	Q9NY59	655 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CLEC2D	Q9UHP7	191 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ING4	Q9UNL4	249 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DIMT1	Q9UNQ2	313 aa	Known RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MOB4	Q9Y3A3	225 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	HSPE1-MOB4	S4R3N1	261 aa		5.8	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TRBV5-5	A0A0J9YX44	114 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022		A0A1W2PP11	408 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022		A0A1W2PPE3	182 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PSMB11	A5LHX3	300 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MAGEA13P	A6NCF6	341 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	C15orf65	H3BRN8	121 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FGF16	O43320	207 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR7C1	O76099	320 aa	Predicted RBP	5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	HTR3B	O95264	441 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CLIC3	O95833	236 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GSTT2	P0CG29	244 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GSTT2B	P0CG30	244 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PF4V1	P10720	104 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CD33	P20138	364 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	BTF3	P20290	206 aa	Known RBP	5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GZMH	P20718	246 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	BDKRB2	P30411	391 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RAB7A	P51149	207 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	EBI3	Q14213	229 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LTC4S	Q16873	150 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	CNPY1	Q3B7I2	92 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	C4orf46	Q504U0	113 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DDI2	Q5TDH0	399 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FAM53A	Q6NSI3	398 aa	Predicted RBP	5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMPRSS11A	Q6ZMR5	421 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022		Q6ZNX1	250 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LINC00596	Q86U02	117 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LYPD6	Q86Y78	171 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR8H3	Q8N146	312 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LINC00311	Q8N616	119 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	C5orf56	Q8N8D9	126 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF555	Q8NEP9	628 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR4X2	Q8NGF9	303 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR13C5	Q8NGS8	318 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MRAP	Q8TCY5	172 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GHSR	Q92847	366 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ST6GALNAC6	Q969X2	333 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PGLYRP3	Q96LB9	341 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	VCX	Q9H320	206 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RHBDL2	Q9NX52	303 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF281	Q9Y2X9	895 aa		5.79	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TRAV8-7	A0A075B6U6	113 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TRBV5-7	A0A0A0MS05	114 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM30CP	A0ZSE6	113 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IRGM	A1A4Y4	181 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LINC01548	A6NM66	108 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022		K7EIL1	84 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	HSD17B6	O14756	317 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ORC5	O43913	435 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF780A	O75290	641 aa	Predicted RBP	5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms