RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CARD17Q5XLA6 110 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 RBMS3Q6XE24 437 aaKnown RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 BEND4Q6ZU67 534 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 FAM57BQ71RH2 274 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 CXorf67Q86X51 503 aaPredicted RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 FAM219AQ8IW50 185 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 LRRC18Q8N456 261 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 ASH1LQ9NR48 2969 aaKnown RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 ZNF319Q9P2F9 582 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 ANXA10Q9UJ72 324 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 HSF4Q9ULV5 492 aa13.25□□□□□ -0.29
CLN8-209ENST00000635970 LSM5Q9Y4Y9 91 aaKnown RBP13.25□□□□□ -0.29
CLN8-209ENST00000635970 DHRS3O75911 302 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 ZNF616Q08AN1 781 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 AKIRIN2Q53H80 203 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 FAM209BQ5JX69 171 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 FBXW9Q5XUX1 488 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 SP5Q6BEB4 398 aaPredicted RBP13.24□□□□□ -0.29
CLN8-209ENST00000635970 Q6ZT83 130 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 PGAM5Q96HS1 289 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 CHST5Q9GZS9 411 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 NECAP2Q9NVZ3 263 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 PARPBPQ9NWS1 579 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 MIOXQ9UGB7 285 aa13.24□□□□□ -0.29
CLN8-209ENST00000635970 BTBD17A6NE02 478 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 H7C1Q1 480 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 LYZL6O75951 148 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 IGHV2-70P01814 119 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 IGHV1-2P23083 117 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 GUCA1AP43080 201 aaPredicted RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 CLINT1Q14677 625 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 C9orf135Q5VTT2 229 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 ZNF701Q9NV72 531 aaPredicted RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 PLEKHJ1Q9NW61 149 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 A6NLC8 198 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 ZNF726A6NNF4 738 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 RER1O15258 196 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 OR8U8P0C7N1 319 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 CHATP28329 748 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 DUSP1P28562 367 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 ETV3LQ6ZN32 361 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 C22orf34Q6ZV56 151 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 LINC01560Q8TB33 94 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 ERGIC1Q969X5 290 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 MRPL24Q96A35 216 aaKnown RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 ELOVL5Q9NYP7 299 aa13.23□□□□□ -0.29
CLN8-209ENST00000635970 FOXD3Q9UJU5 478 aaPredicted RBP13.23□□□□□ -0.29
CLN8-209ENST00000635970 TRAV20A0A0B4J274 112 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 A0A1W2PPH5 198 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 DHRS7CA6NNS2 312 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 FBP1P09467 338 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 OR5H8P0DN80 308 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 SLC2A1P11166 492 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 TMEM187Q14656 261 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 PHYHD1Q5SRE7 291 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 CRIP3Q6Q6R5 217 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 ZNF565Q8N9K5 539 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 GJC3Q8NFK1 279 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 SOX7Q9BT81 388 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 PKDREJQ9NTG1 2253 aa13.22□□□□□ -0.29
CLN8-209ENST00000635970 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 PRH1P02810 166 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 CBR1P16152 277 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 COX5AP20674 150 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 SERPINA2P20848 420 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 UCP3P55916 312 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 PIGPP57054 158 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 RAB2AP61019 212 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ABCA11PQ4W5N1 156 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ZNF787Q6DD87 383 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 C1QL2Q7Z5L3 287 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 Q96M66 194 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 SMIM3Q9BZL3 60 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 TMED3Q9Y3Q3 217 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 DMRT1Q9Y5R6 373 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.29
CLN8-209ENST00000635970 CENPEQ02224 2701 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 A0A1W2PPE3 182 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 C16orf97H3BN30 126 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 QDPRP09417 244 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ZNF728P0DKX0 622 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 CDAP32320 146 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 AKR1C3P42330 323 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ADAM5Q6NVV9 412 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 LIAT1Q6ZQX7 453 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 LGI3Q8N145 548 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 FAM24BQ8N5W8 94 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 ZNF837Q96EG3 531 aaPredicted RBP13.21□□□□□ -0.29
CLN8-209ENST00000635970 C18orf12Q96KH6 178 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 CRIM1Q9NZV1 1036 aa13.21□□□□□ -0.29
CLN8-209ENST00000635970 PRR14LQ5THK1 2151 aa13.21□□□□□ -0.3
CLN8-209ENST00000635970 HRNRQ86YZ3 2850 aaPredicted RBP13.2□□□□□ -0.3
CLN8-209ENST00000635970 A0A087WWC5 75 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms