RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 PIK3C2GO75747 1445 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MBD5Q9P267 1494 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ANKRD26Q9UPS8 1709 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 N4BP2Q86UW6 1770 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 SIPA1L1O43166 1804 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 XIRP1Q702N8 1843 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 DENND4AQ7Z401 1863 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF106Q9H2Y7 1883 aaKnown RBP2.3□□□□□ -2.04
CNOT1-223ENST00000628857 NCKAP5O14513 1909 aa2.3□□□□□ -2.04
CNOT1-223ENST00000628857 MYH6P13533 1939 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FOCADQ5VW36 1801 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZC3H13Q5T200 1668 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 DENND4BO75064 1496 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 GOLGA3Q08378 1498 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TRAPPC8Q9Y2L5 1435 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 IGHV2-70DA0A0C4DH43 119 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 PNMA8CA0A1B0GUJ8 204 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TCRBV9S1A1TA0A576 114 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SRRM4A7MD48 611 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CLDN25C9JDP6 229 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 F5H5K5 113 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 INMT-MINDY4F8WBC2 141 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TNFRSF11BO00300 401 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 UBFD1O14562 309 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CCL25O15444 150 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 RBFOX2O43251 390 aaKnown RBP eCLIP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CLDN11O75508 207 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 MMP23AO75900 390 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SOX14O95416 240 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 GCGP01275 180 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CD2P06729 351 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SNRPCP09234 159 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 UCHL1P09936 223 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SMIM17P0DL12 118 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CT45A6P0DMU7 189 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CT45A5P0DMU8 189 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CT45A7P0DMV0 189 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ESDP10768 282 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CD79AP11912 226 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TDGF1P13385 188 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 IGFBP3P17936 291 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TCN2P20062 427 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 AZU1P20160 251 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 LOXP28300 417 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 HRH1P35367 487 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 GLRXP35754 106 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OPRD1P41143 372 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ETV6P41212 452 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OR1E2P47887 323 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 EMP1P54849 157 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 DLX1P56177 255 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 NCS1P62166 190 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 PLCXD2Q0VAA5 305 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SMAGPQ0VAQ4 97 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FABP9Q0Z7S8 132 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF154Q13106 437 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 KLF5Q13887 457 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 Q1RN00 199 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SLC25A35Q3KQZ1 300 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CT45A1Q5HYN5 189 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TPTE2P1Q5T6R2 138 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FAM27D1Q5T7N8 215 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OR10K2Q6IF99 312 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 WDR59Q6PJI9 974 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SLC25A48Q6ZT89 311 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FAM231DQ6ZW35 169 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 NAA40Q86UY6 237 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 H1FOOQ8IZA3 346 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 UMODL1-AS1Q8N2C9 162 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OSR2Q8N2R0 312 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OR2K2Q8NGT1 345 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OR4X1Q8NH49 305 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZNRF2Q8NHG8 242 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CT45A3Q8NHU0 189 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FLVCR1-AS1Q8TAF5 88 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZNF502Q8TBZ5 544 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 RDH11Q8TC12 318 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 GPR119Q8TDV5 335 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ITLN1Q8WWA0 313 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 MBD3L1Q8WWY6 194 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 DEDD2Q8WXF8 326 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 PTX4Q96A99 478 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TADA1Q96BN2 335 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 LRRC58Q96CX6 371 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 ZMYND19Q96E35 227 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 DYNLL2Q96FJ2 89 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CYYR1Q96J86 154 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CCDC115Q96NT0 180 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 OXGR1Q96P68 337 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 TP53RKQ96S44 253 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 FOXC2Q99958 501 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 NIPSNAP3BQ9BS92 247 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 PBDC1Q9BVG4 233 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 SMIM3Q9BZL3 60 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 NKX6-2Q9C056 277 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 C20orf27Q9GZN8 174 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 CDC42EP4Q9H3Q1 356 aaKnown RBP2.29□□□□□ -2.04
CNOT1-223ENST00000628857 NANOGQ9H9S0 305 aa2.29□□□□□ -2.04
CNOT1-223ENST00000628857 RNF122Q9H9V4 155 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms