RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 OR2C3Q8N628 320 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CLEC18CQ8NCF0 446 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR5D13Q8NGL4 314 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR10J5Q8NHC4 309 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 LILRB1Q8NHL6 650 aaPredicted RBP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 IL22RA2Q969J5 263 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 KIRREL1Q96J84 757 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 GPHA2Q96T91 129 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CABLES2Q9BTV7 478 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ADAT1Q9BUB4 502 aaKnown RBP7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 CDH20Q9HBT6 801 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PARD6AQ9NPB6 346 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 LUZP4Q9P127 313 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR2W1Q9Y3N9 320 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 ARID1AO14497 2285 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PRR14LQ5THK1 2151 aa7.08□□□□□ -1.28
SND1-IT1-201ENST00000623342 PGLYRP1O75594 196 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 IGHG3P01860 377 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 SFTA3P0C7M3 94 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR8U9P0C7N5 309 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 VDAC1P21796 283 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 IGHV1-2P23083 117 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 MDH2P40926 338 aaKnown RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 RAB5CP51148 216 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 DVL1P1P54792 670 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 POLR2GP62487 172 aaKnown RBP eCLIP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 FAM76BQ5HYJ3 339 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 PIP4P1Q86T03 277 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 WDR86Q86TI4 376 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 Q8IYB0 196 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 H1FOOQ8IZA3 346 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 SUMF1Q8NBK3 374 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR8U1Q8NH10 309 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR2J1Q9GZK6 312 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CLCF1Q9UBD9 225 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 POLDIP2Q9Y2S7 368 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 PIGBOS1A0A0B4J2F0 54 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 A0A1W2PR80 420 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 FAM24AA6NFZ4 105 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CDRT15L2A8MXV6 281 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 C3orf80F5H4A9 247 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 NKX2-8O15522 239 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 TNFSF12O43508 249 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 TSPAN15O95858 294 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CD80P33681 288 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CAMLGP49069 296 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 IDH3GP51553 393 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CCL11P51671 97 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 VAMP2P63027 116 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 SRSF6Q13247 344 aaKnown RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 IGFBP7Q16270 282 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 DHRS7BQ6IAN0 325 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 TMEM88Q6PEY1 159 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 COMMD1Q8N668 190 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 SCCPDHQ8NBX0 429 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 SLC25A31Q9H0C2 315 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 PARP12Q9H0J9 701 aaKnown RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 PLEKHF2Q9H8W4 249 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 TREM2Q9NZC2 230 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 CACFD1Q9UGQ2 172 aa7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 STRAPQ9Y3F4 350 aaKnown RBP7.07□□□□□ -1.28
SND1-IT1-201ENST00000623342 IGSF23A1L1A6 192 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 NPIPB11E5RHQ5 1161 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ATP6V1G2-DDX39BF2Z307 99 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 SSSCA1O60232 199 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 LYZL6O75951 148 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 MMP9P14780 707 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 RAC2P15153 192 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 CTRB1P17538 263 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 F2RP25116 425 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 NPBWR1P48145 328 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ERVK11-1P61568 191 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ID3Q02535 119 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ZNF616Q08AN1 781 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ZNF266Q14584 549 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 GABRA6Q16445 453 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 MIDNQ504T8 468 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 CXorf66Q5JRM2 361 aaPredicted RBP7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 CTRB2Q6GPI1 263 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 INO80CQ6PI98 192 aaPredicted RBP7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 Q6ZT83 130 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 FAM214BQ7L5A3 538 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 MOB1BQ7L9L4 216 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 GCNT2Q8N0V5 402 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 HSD17B11Q8NBQ5 300 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 SLC25A40Q8TBP6 338 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 TRIB1Q96RU8 372 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 SH3BGRL3Q9H299 93 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 ERRFI1Q9UJM3 462 aaPredicted RBP7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 IQCF6A8MYZ5 107 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 FAM157AC9JC47 383 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 SIRPB1O00241 398 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 SLC33A1O00400 549 aaPredicted RBP7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 PITX3O75364 302 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 OR2H2O95918 312 aa7.06□□□□□ -1.28
SND1-IT1-201ENST00000623342 PRH1P02810 166 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms