RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 NFAM1Q8NET5 270 aaPredicted RBP8.55□□□□□ -1.04
CLTCL1-211ENST00000621271 APELAP0DMC3 54 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 NQO2P16083 231 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 PJVKQ0ZLH3 352 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 FAM27BQ5VT28 67 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 PDPNQ86YL7 162 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 FAM219AQ8IW50 185 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 COMMD1Q8N668 190 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 OR1L8Q8NGR8 309 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 CXorf58Q96LI9 332 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 NPAS1Q99742 590 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 DTX4Q9Y2E6 619 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 A0A1W2PR77 199 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 MGST3O14880 152 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 SYNGR1O43759 233 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 CLDN14O95500 239 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 ORM1P02763 201 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 SCAND1P57086 179 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 TIAL1Q01085 375 aaKnown RBP eCLIP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 LAMTOR1Q6IAA8 161 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 EBLN2Q6P2I7 272 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 LIAT1Q6ZQX7 453 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 RNF122Q9H9V4 155 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 YAE1D1Q9NRH1 226 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 STARD10Q9Y365 291 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 CCL27Q9Y4X3 112 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 B9A039 149 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 MEOX2P50222 304 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 UBE2L3P68036 154 aaKnown RBP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 Q1RN00 199 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 FADS6Q8N9I5 356 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 BVESQ8NE79 360 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 IL19Q9UHD0 177 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 PRSS50Q9UI38 385 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 MRM2Q9UI43 246 aaKnown RBP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 TMEM229AB2RXF0 380 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 SYNGR3O43761 229 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 CXCL3P19876 107 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 GGNBP1Q5YKI7 109 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 CENPVQ7Z7K6 275 aaPredicted RBP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 NTNG2Q96CW9 530 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 MARS2Q96GW9 593 aaKnown RBP8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 UFC1Q9Y3C8 167 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 ZNF318Q5VUA4 2279 aa8.54□□□□□ -1.04
CLTCL1-211ENST00000621271 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.045e-12■■■■■ 52.1
CLTCL1-211ENST00000621271 LY6EQ16553 131 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 ATP6V1FQ16864 119 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 CABLES2Q9BTV7 478 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 LOC102723971A0A1B0GUV8 181 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 CTDSPLO15194 276 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 PTHLHP12272 177 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 TFPI2P48307 235 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 UNQ9370/PRO34162Q6UXP9 181 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 LTBP1Q14766 1721 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 COL4A1P02462 1669 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 LOC105371242A0A075B767 164 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 OR2T8A6NH00 312 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 RPS4Y1P22090 263 aaKnown RBP8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 GALR1P47211 349 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 NSUN5P2Q63ZY6 315 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 OR11H7Q8NGC8 314 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 RNF133Q8WVZ7 376 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 STARD4Q96DR4 205 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 RAB29O14966 203 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 MC5RP33032 325 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 HLA-DRB3P79483 266 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 DHRS2Q13268 280 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 ANXA10Q9UJ72 324 aa8.53□□□□□ -1.04
CLTCL1-211ENST00000621271 PPIAL4CA0A0B4J2A2 164 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 A0A1W2PPE3 182 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 A0A1W2PS18 150 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 CTAG2O75638 210 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 PPIAL4GP0DN37 164 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 ROM1Q03395 351 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 CLEC9AQ6UXN8 241 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 STPG2Q8N412 459 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 OR1L6Q8NGR2 347 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 OR10AC1Q8NH08 325 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 TMPRSS5Q9H3S3 457 aa8.52□□□□□ -1.04
CLTCL1-211ENST00000621271 CHST1O43916 411 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 OR5AC1P0C628 307 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 LTBRP36941 435 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 RPL13AP40429 203 aaKnown RBP8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 ZBTB34Q8NCN2 500 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 ELF5Q9UKW6 265 aaPredicted RBP8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 UNC13CQ8NB66 2214 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 FAM186AA6NE01 2351 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 SFT2D2O95562 160 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 GNG4P50150 75 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 RPS4XP62701 263 aaKnown RBP8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 PSG4Q00888 419 aa8.52□□□□□ -1.05
CLTCL1-211ENST00000621271 INPP5JQ15735 1006 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms