RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FOSL1P15407 271 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CASP6P55212 293 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PLGLAQ15195 96 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SHBQ15464 509 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 IZUMO4Q1ZYL8 232 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MPV17LQ2QL34 196 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CXorf66Q5JRM2 361 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MYPOPQ86VE0 399 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 OR5C1Q8NGR4 320 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SLC2A9Q9NRM0 540 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 WSB1Q9Y6I7 421 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CREBBPQ92793 2442 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 FREM1Q5H8C1 2179 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 IGHV5-10-1A0A0J9YXX1 117 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MDFIC2A0A1B0GVS7 189 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 C5orf49A4QMS7 147 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF587BE7ETH6 402 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 H0Y8G0 127 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SIRPB1O00241 398 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 DEGS1O15121 323 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 TRGC1P0CF51 173 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MGST1P10620 155 aaKnown RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PSMB3P49720 205 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 ELOBQ15370 118 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF574Q6ZN55 896 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 C1orf87Q8N0U7 546 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SLC35G3Q8N808 338 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 ST8SIA1Q92185 356 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 WFIKKN1Q96NZ8 548 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PLEKHF2Q9H8W4 249 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 OCIAD1Q9NX40 245 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 POMT1Q9Y6A1 747 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 BTBD17A6NE02 478 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 KLRC4-KLRK1H3BQV0 150 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 TIMM8AO60220 97 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 DFFBO76075 338 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SNRPCP09234 159 aaKnown RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 G0S2P27469 103 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SPATA46Q5T0L3 261 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 LFNGQ8NES3 379 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MUCL1Q96DR8 90 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 USF3Q68DE3 2245 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 KIR2DS1A0A191URI9 304 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CRYM-AS1A6NIL9 109 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 RAB4AP20338 218 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 KIR2DS4P43632 304 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 EWSR1Q01844 656 aaKnown RBP eCLIP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 KIR2DS1Q14954 304 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 WDR25Q64LD2 544 aaPredicted RBP6.04□□□□□ -1.44
NEDD9-216ENST00000620854 FAM185AQ8N0U4 392 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 OR10G3Q8NGC4 313 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 OR4F5Q8NH21 305 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SAP25Q8TEE9 199 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 MISP3Q96FF7 219 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 LYZL4Q96KX0 146 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 OR4F4Q96R69 305 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 PRDM13Q9H4Q3 707 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 TUBA4BQ9H853 241 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 P4HTMQ9NXG6 502 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 B3GAT1Q9P2W7 334 aa6.04□□□□□ -1.44
NEDD9-216ENST00000620854 CHD3Q12873 2000 aaKnown RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 FER1L5A0AVI2 2057 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 LIPT2A6NK58 231 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 C3orf80F5H4A9 247 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 MMP7P09237 267 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 CEACAM16Q2WEN9 425 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 OR2C3Q8N628 320 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 DEFB108BQ8NET1 73 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 TP53RKQ96S44 253 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 NAA60Q9H7X0 242 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 LAMP3Q9UQV4 416 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 C2orf16Q68DN1 1984 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 OR5H1A6NKK0 313 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 SERPINE3A8MV23 424 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 TNFSF11O14788 317 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 BMP5P22003 454 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 DDTP30046 118 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF154Q13106 437 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 TMEM171Q8WVE6 324 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 OXGR1Q96P68 337 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 MOB1AQ9H8S9 216 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 MUC3AQ02505 3323 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 AQP7O14520 342 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 VAMP5O95183 116 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 CTSDP07339 412 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 ECI1P42126 302 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 UBE2G2P60604 165 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 LSM6P62312 80 aaKnown RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 FOXC1Q12948 553 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 CLN3Q13286 438 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 TMEM187Q14656 261 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF385CQ66K41 422 aaPredicted RBP6.03□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF787Q6DD87 383 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 OR4A16Q8NH70 328 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 APH1AQ96BI3 265 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 FAM210BQ96KR6 192 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 PACRGQ96M98 296 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms