RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 NKX2-6A6NCS4 301 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 CGB1A6NKQ9 187 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 SFT2D2O95562 160 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 LIMS3P0CW19 117 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 LIMS4P0CW20 117 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 PMELP40967 661 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 OR3A4PP47883 348 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 EWSR1Q01844 656 aaKnown RBP eCLIP4.76□□□□□ -1.65
CCNT1-205ENST00000618666 PAX2Q02962 417 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 KLF9Q13886 244 aaPredicted RBP4.76□□□□□ -1.65
CCNT1-205ENST00000618666 PRSS57Q6UWY2 283 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 ARHGEF39Q8N4T4 335 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 TTC9BQ8N6N2 239 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 P2RX4Q99571 388 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 RBKSQ9H477 322 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 ZFP30Q9Y2G7 519 aa4.76□□□□□ -1.65
CCNT1-205ENST00000618666 CEP250Q9BV73 2442 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 IGHV3-15A0A0B4J1V0 119 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 IGKV6D-41A0A0C4DH26 115 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 C1QTNF9BB2RNN3 333 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 IL4P05112 153 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 EVI2AP22794 236 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 CD226Q15762 336 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 TMEM240Q5SV17 173 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 TCTN3Q6NUS6 607 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 DOLPP1Q86YN1 238 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 RFESDQ8TAC1 157 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 EPHX3Q9H6B9 360 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 KIAA1456Q9P272 454 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 CBLCQ9ULV8 474 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 LRP12Q9Y561 859 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 HS3ST3A1Q9Y663 406 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 A1L4Q6 167 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 GLRXP35754 106 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 KHDC1LQ5JSQ8 128 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 ASPHD1Q5U4P2 390 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 C1QL4Q86Z23 238 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 OR2K2Q8NGT1 345 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 DIO2Q92813 273 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SMIM19Q96E16 107 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SCARF2Q96GP6 870 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 GABRG3Q99928 467 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 ANKRD10Q9NXR5 420 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 UNC13CQ8NB66 2214 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 A0A0U1RRA0 63 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 COLCA2A8K830 154 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 CCL25O15444 150 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 OR2A4O95047 310 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 TSPAN7P41732 249 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 LOXL3P58215 753 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 LCN2P80188 198 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 MORN1Q5T089 497 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 MRPL43Q8N983 215 aaKnown RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SLC25A40Q8TBP6 338 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 ZG16BQ96DA0 208 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 OR2A7Q96R45 310 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 TMEM262E9PQX1 116 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SOCS1O15524 211 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SPINT2O43291 252 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 CLDN17P56750 224 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 HIST1H1AQ02539 215 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 WDR5BQ86VZ2 330 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 ASB5Q8WWX0 329 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 RAB40CQ96S21 281 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 CACFD1Q9UGQ2 172 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 PPIL1Q9Y3C6 166 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 HDGFL3Q9Y3E1 203 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 WNT6Q9Y6F9 365 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 A0A0G2JLL6 359 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 SHISA8B8ZZ34 492 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 NDUFA3O95167 84 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 HOXB9P17482 250 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 DLX1P56177 255 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 C9orf153Q5TBE3 101 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 PRRT2Q7Z6L0 340 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 DEFB108BQ8NET1 73 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 PTX4Q96A99 478 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 ZNF625Q96I27 306 aaPredicted RBP4.75□□□□□ -1.65
CCNT1-205ENST00000618666 NPFFR1Q9GZQ6 430 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 GPR84Q9NQS5 396 aa4.75□□□□□ -1.65
CCNT1-205ENST00000618666 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 NPIPB15A6NHN6 443 aaPredicted RBP4.74□□□□□ -1.65
CCNT1-205ENST00000618666 CLEC3AO75596 197 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 CTXN2P0C2S0 81 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 CST5P28325 142 aaPredicted RBP4.74□□□□□ -1.65
CCNT1-205ENST00000618666 RPS15AP62244 130 aaKnown RBP4.74□□□□□ -1.65
CCNT1-205ENST00000618666 FOXK1P85037 733 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 PLP2Q04941 152 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 FAM78AQ5JUQ0 283 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 TIMM23BQ5SRD1 257 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 GKN2Q86XP6 184 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 SCCPDHQ8NBX0 429 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 UBL7Q96S82 380 aaPredicted RBP4.74□□□□□ -1.65
CCNT1-205ENST00000618666 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.74□□□□□ -1.65
CCNT1-205ENST00000618666 MTFP1Q9UDX5 166 aa4.74□□□□□ -1.65
CCNT1-205ENST00000618666 CAMTA1Q9Y6Y1 1673 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms