RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TRAPPC2LQ9UL33 140 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 TLN1Q9Y490 2541 aaKnown RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 TRDCB7Z8K6 153 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 RNF224P0DH78 156 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 CEACAM1P13688 526 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 LGI3Q8N145 548 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 PLPPR1Q8TBJ4 325 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 WNT2BQ93097 391 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 PRRX2Q99811 253 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 GSN-AS1Q9NRJ2 163 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 GLRX2Q9NS18 164 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 DUSP13Q9UII6 198 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 ATP23Q9Y6H3 246 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 NKX2-6A6NCS4 301 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 ZNF16P17020 682 aaPredicted RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 INO80CQ6PI98 192 aaPredicted RBP10.53□□□□□ -0.72
CIITA-212ENST00000618207 LDLRAD3Q86YD5 345 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 ZNF695Q8IW36 515 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 TPRX1Q8N7U7 411 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 CCDC71LQ8N9Z2 235 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 RSRP1Q9BUV0 290 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 FBXL17Q9UF56 701 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 PROCRQ9UNN8 238 aa10.53□□□□□ -0.72
CIITA-212ENST00000618207 IGF2RP11717 2491 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 ZNF705EA8MWA4 302 aaPredicted RBP10.52□□□□□ -0.73
CIITA-212ENST00000618207 PROB1E7EW31 1015 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 AGPAT2O15120 278 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 MLNRO43193 412 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 DEDDO75618 318 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 TNFSF13O75888 250 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 EPHA1P21709 976 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 ZNF83P51522 516 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 TMEM33P57088 247 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 SEM1Q6ZVN7 128 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 OR10J5Q8NHC4 309 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 STARD4Q96DR4 205 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 GALNT14Q96FL9 552 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 SHARPINQ9H0F6 387 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 GLS2Q9UI32 602 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 KIR2DS1A0A191URI9 304 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 MED19A0JLT2 244 aaPredicted RBP10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A10PA6NDY2 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A18PA6NE21 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A16PA6NEW6 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A20PA6NIJ5 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A7PA6NKC0 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A22PA8MWA6 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A12PA8MX19 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A5PA8MXJ8 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A23PA8MXZ1 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FGF2P09038 288 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A15PP0C7V4 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A13PP0C7W8 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A14PP0C7W9 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 FAM90A24PP0C7X0 464 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 OMGP23515 440 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 KIR2DS4P43632 304 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 ID4P47928 161 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 RAB13P51153 203 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 KIR2DS1Q14954 304 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 AQP10Q96PS8 301 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 SUCNR1Q9BXA5 334 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 TAF9BQ9HBM6 251 aa10.52□□□□□ -0.73
CIITA-212ENST00000618207 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 RAC2P15153 192 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 DEFA5Q01523 94 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 PCSK4Q6UW60 755 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 SNIP1Q8TAD8 396 aaKnown RBP10.51□□□□□ -0.73
CIITA-212ENST00000618207 PLK3Q9H4B4 646 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 BARX1Q9HBU1 254 aaPredicted RBP10.51□□□□□ -0.73
CIITA-212ENST00000618207 TMEM100Q9NV29 134 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 RELNP78509 3460 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 LRP5LA4QPB2 252 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 A8MXK9 166 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 CBR1P16152 277 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 NHLH2Q02577 135 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 GUSBP1Q15486 140 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 Q6P435 159 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 SPACA1Q9HBV2 294 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 KCNS2Q9ULS6 477 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 PPP1R3CQ9UQK1 317 aa10.51□□□□□ -0.73
CIITA-212ENST00000618207 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
CIITA-212ENST00000618207 PTPRQQ9UMZ3 2332 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 GPR31O00270 319 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 IGKV3-15P01624 115 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 ZP3P21754 424 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 SRSF3P84103 164 aaKnown RBP10.5□□□□□ -0.73
CIITA-212ENST00000618207 GTF3AQ92664 365 aaKnown RBP10.5□□□□□ -0.73
CIITA-212ENST00000618207 PHYHIPLQ96FC7 376 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 PLPPR2Q96GM1 343 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 C18orf12Q96KH6 178 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 PKIBQ9C010 78 aa10.5□□□□□ -0.73
CIITA-212ENST00000618207 TUBD1Q9UJT1 453 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms