RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SPRNQ5BIV9 151 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 CLLU1Q5K131 121 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 MOB1BQ7L9L4 216 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 LHFPL5Q8TAF8 219 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 LRRC29Q8WV35 223 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 CCL28Q9NRJ3 127 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 GLS2Q9UI32 602 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 MEMO1Q9Y316 297 aa14.61□□□□□ -0.07
PCDHGC3-205ENST00000617641 C3orf85A0A1B0GTC6 90 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 GPR31O00270 319 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 BCL2L11O43521 198 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 B3GALNT1O75752 331 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 MZT1Q08AG7 82 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 PRSS54Q6PEW0 395 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 TBC1D26Q86UD7 250 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 FOXRED2Q8IWF2 684 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 H1FOOQ8IZA3 346 aaPredicted RBP14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 GSX2Q9BZM3 304 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 SPTBN4Q9H254 2564 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 LINC00862A6NCI5 91 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 LMO1P25800 156 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 CD200P41217 278 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 RAB14P61106 215 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 MEX3BQ6ZN04 569 aaKnown RBP14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 FAM185AQ8N0U4 392 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 LRTM2Q8N967 370 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 C18orf12Q96KH6 178 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 ELOVL5Q9NYP7 299 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 METRNQ9UJH8 293 aa14.6□□□□□ -0.07
PCDHGC3-205ENST00000617641 TLN1Q9Y490 2541 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 LYL1P12980 280 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 EGR1P18146 543 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 SMIM21Q3B7S5 101 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 WFDC8Q8IUA0 241 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 LGI3Q8N145 548 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR2V2Q96R30 315 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 MRPL37Q9BZE1 423 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 MBNL3Q9NUK0 354 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 JKAMPQ9P055 326 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 ERRFI1Q9UJM3 462 aaPredicted RBP14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR2W1Q9Y3N9 320 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 WIPI2Q9Y4P8 454 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 IGLV3-9A0A075B6K5 115 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 MSGN1A6NI15 193 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 SPRY3O43610 288 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 RLN2P04090 185 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 RND3P61587 244 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 RBPJQ06330 500 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 OR1S1Q8NH92 325 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 SCARB1Q8WTV0 552 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 TAF9BQ9HBM6 251 aa14.59□□□□□ -0.07
PCDHGC3-205ENST00000617641 POM121CA8CG34 1229 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 LUMP51884 338 aaPredicted RBP14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 RPS23P62266 143 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 UBA52P62987 128 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 PRR7Q8TB68 274 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 ST8SIA2Q92186 375 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 ZNF471Q9BX82 626 aaPredicted RBP14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 TUBD1Q9UJT1 453 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 TMEM30CPA0ZSE6 113 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 LEUTXA8MZ59 168 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 TNFSF12O43508 249 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 COL10A1Q03692 680 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 AESQ08117 197 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 HMGN3Q15651 99 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 BOLLQ8N9W6 283 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 MEGF10Q96KG7 1140 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 TMEM222Q9H0R3 208 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 KIF25Q9UIL4 384 aa14.58□□□□□ -0.08
PCDHGC3-205ENST00000617641 ARID1AO14497 2285 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 NPIPB11E5RHQ5 1161 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 PET100P0DJ07 73 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 OR3A1P47881 315 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 TMEM268Q5VZI3 342 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 MOGAT3Q86VF5 341 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 CD177Q8N6Q3 437 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 SLC35G3Q8N808 338 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 COQ2Q96H96 371 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 CNTNAP3BQ96NU0 1288 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 USB1Q9BQ65 265 aaKnown RBP14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 CNTNAP3Q9BZ76 1288 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 UBE2J1Q9Y385 318 aaPredicted RBP14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 HSPA12AO43301 675 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 SCGB1D2O95969 90 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 THBDP07204 575 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 TESK1Q15569 626 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 TMEM108Q6UXF1 575 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 ITLN1Q8WWA0 313 aa14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 PARP12Q9H0J9 701 aaKnown RBP14.57□□□□□ -0.08
PCDHGC3-205ENST00000617641 PCNX1Q96RV3 2341 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 SRRM5B3KS81 715 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 F5H0A9 414 aaPredicted RBP14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 KIAA2026Q5HYC2 2103 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 SLC35E4Q6ICL7 350 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 CMTM1Q8IZ96 169 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 OR10V1Q8NGI7 309 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 RND1Q92730 232 aa14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 LSM5Q9Y4Y9 91 aaKnown RBP14.56□□□□□ -0.08
PCDHGC3-205ENST00000617641 IFNL4K9M1U5 179 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms