RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 LGALS7P47929 136 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 ACSM6Q6P461 480 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 TBC1D26Q86UD7 250 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 LHX4Q969G2 390 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 CCL19Q99731 98 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 GINS3Q9BRX5 216 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 NDFIP1Q9BT67 221 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 PARD6AQ9NPB6 346 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 SMCO4Q9NRQ5 59 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM157AC9JC47 383 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 E9PLN8 166 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 SMPD2O60906 423 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 RBP4P02753 201 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 SLC25A6P12236 298 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 CD40P25942 277 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 FAM3AP98173 230 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 HOGA1Q86XE5 327 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 FLYWCH2Q96CP2 140 aaKnown RBP8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 WDR89Q96FK6 387 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 VKORC1Q9BQB6 163 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 RHOFQ9HBH0 211 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 UQCC1Q9NVA1 299 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 SS18L1O75177 396 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 NAT2P11245 290 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 PLA2G2CQ5R387 149 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 GGNBP1Q5YKI7 109 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 H3F3CQ6NXT2 135 aa8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 BCL2L2Q92843 193 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-208ENST00000615606 GFRA1P56159 465 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 KCNMB1Q16558 191 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 ARTNQ5T4W7 220 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 FNDC7Q5VTL7 733 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 SPNS3Q6ZMD2 512 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 BAP18Q8IXM2 172 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 G6PC2Q9NQR9 355 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 SCN2AQ99250 2005 aa8.15□□□□□ -1.11
CLTCL1-208ENST00000615606 IGHV1-69-2A0A0G2JMI3 117 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM8BA6NDV4 472 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 K7N7A8 449 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CLDN14O95500 239 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CECR9P0C854 216 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MGST1P10620 155 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MPV17P39210 176 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 NBL1P41271 181 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 ENDOGQ14249 297 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 C1orf100Q5SVJ3 147 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 C11orf87Q6NUJ2 197 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNF826PQ6ZT77 177 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 NMES1Q9C002 83 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TRBV5-7A0A0A0MS05 114 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 ZNHIT1O43257 154 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CST7O76096 145 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 OR2H2O95918 312 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM11P17152 192 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TAGLN2P37802 199 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 LY6DQ14210 128 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 LCN15Q6UWW0 184 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 GAPTQ8N292 157 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 DPF1Q92782 380 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CCL28Q9NRJ3 127 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TNFRSF19Q9NS68 423 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MTCH1Q9NZJ7 389 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 UBE2L5PA0A1B0GUS4 154 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 LRRC3CA6NJW4 275 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CD200P41217 278 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 CRYBA2P53672 197 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MPPED2Q15777 294 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 ETV3LQ6ZN32 361 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 GLRX5Q86SX6 157 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 GRAMD2BQ96HH9 432 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 PGLYRP3Q96LB9 341 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 PRNDQ9UKY0 176 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 GPR179Q6PRD1 2367 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TRAV39A0A0B4J263 110 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 OR13C7P0DN81 318 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 NQO2P16083 231 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 ADIRFQ15847 76 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 HARBI1Q96MB7 349 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MIXL1Q9H2W2 232 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 PATZ1Q9HBE1 687 aaKnown RBP8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 MED9Q9NWA0 146 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 TIMM9Q9Y5J7 89 aa8.14□□□□□ -1.11
CLTCL1-208ENST00000615606 RAB29O14966 203 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 SYNGR1O43759 233 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 SCGB1D1O95968 90 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 VDAC1P21796 283 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 IGHV1-2P23083 117 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 NPBWR1P48145 328 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 GZMKP49863 264 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 EFNB2P52799 333 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 LRRC75AQ8NAA5 344 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 DHRS9Q9BPW9 319 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 TMEM147Q9BVK8 224 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 COL25A1Q9BXS0 654 aaPredicted RBP8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 GNG13Q9P2W3 67 aa8.13□□□□□ -1.11
CLTCL1-208ENST00000615606 CCDC88CQ9P219 2028 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms