RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ZFAND1Q8TCF1 268 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 FAM222BQ8WU58 562 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 ITLN2Q8WWU7 325 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 NEUROG1Q92886 237 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 TMEM204Q9BSN7 226 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 TRAF4Q9BUZ4 470 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 TMPRSS13Q9BYE2 586 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF436Q9C0F3 470 aaPredicted RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 MS4A5Q9H3V2 200 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 MBNL3Q9NUK0 354 aaKnown RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 MGAT4CQ9UBM8 478 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 TRAPPC2LQ9UL33 140 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PCDHB10Q9UN67 800 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 PPP1R3CQ9UQK1 317 aa7.47□□□□□ -1.21
CCDC47-207ENST00000612558 C14orf166Q9Y224 244 aaKnown RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 SMG1Q96Q15 3661 aaKnown RBP7.47□□□□□ -1.21
CCDC47-207ENST00000612558 IGKV1D-17A0A075B6S4 117 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 TMEM30CPA0ZSE6 113 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 LRRC30A6NM36 301 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 DEFB108AA8MXU0 73 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 DIRAS3O95661 229 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 C1QBP02746 253 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 CTSDP07339 412 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF728P0DKX0 622 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 RCC1P18754 421 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 CD34P28906 385 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 OR3A1P47881 315 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 HERV-K104P61576 105 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 SEC61A1P61619 476 aaKnown RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 HLA-DRB3P79483 266 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 PAX5Q02548 391 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 BAMBIQ13145 260 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 MST1LQ2TV78 715 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF672Q499Z4 452 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 NOXA1Q86UR1 476 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 CD177Q8N6Q3 437 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 DRAXINQ8NBI3 349 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 UXS1Q8NBZ7 420 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 OR5T2Q8NGG2 359 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 LILRB1Q8NHL6 650 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 PPP1R35Q8TAP8 253 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 MITD1Q8WV92 249 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 TMEM230Q96A57 120 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 MOB3AQ96BX8 217 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 PIK3IP1Q96FE7 263 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 SNX22Q96L94 193 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 PHB2Q99623 299 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 CLEC4MQ9H2X3 399 aaPredicted RBP7.46□□□□□ -1.21
CCDC47-207ENST00000612558 DYNLRB1Q9NP97 96 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 SLC23A1Q9UHI7 598 aa7.46□□□□□ -1.21
CCDC47-207ENST00000612558 TRBV6-7A0A0A0MS04 114 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 IGKV1-6A0A0C4DH72 117 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 BET1O15155 118 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF737O75373 536 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SLC22A5O76082 557 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 OR2A4O95047 310 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF205O95201 554 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SFT2D2O95562 160 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 DUS4LO95620 317 aaKnown RBP7.46□□□□□ -1.22
CCDC47-207ENST00000612558 PPYP01298 95 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 PI3P19957 117 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 AADACP22760 399 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 NFYAP23511 347 aaPredicted RBP7.46□□□□□ -1.22
CCDC47-207ENST00000612558 VAMP1P23763 118 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 LOXP28300 417 aaPredicted RBP7.46□□□□□ -1.22
CCDC47-207ENST00000612558 GABRA2P47869 451 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 FXYD4P59646 89 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 AESQ08117 197 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 HERPUD1Q15011 391 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SWI5Q1ZZU3 235 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 LPCAT3Q6P1A2 487 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SLC38A6Q8IZM9 456 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 ZCCHC24Q8N2G6 241 aaKnown RBP7.46□□□□□ -1.22
CCDC47-207ENST00000612558 ASCC1Q8N9N2 400 aaKnown RBP7.46□□□□□ -1.22
CCDC47-207ENST00000612558 OR10J5Q8NHC4 309 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 ANGPTL6Q8NI99 470 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 TOMM40LQ969M1 308 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 OR2A7Q96R45 310 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 CABLES2Q9BTV7 478 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SHARPINQ9H0F6 387 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 SAP30LQ9HAJ7 183 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 DLL4Q9NR61 685 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 KCNIP1Q9NZI2 227 aa7.46□□□□□ -1.22
CCDC47-207ENST00000612558 DSCAMO60469 2012 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 IGHV3OR15-7A0A075B7D8 119 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 A0A0B4J2A0 478 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 FAM172BPA6NC97 362 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 OOEPA6NGQ2 149 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 GOSR2O14653 212 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 MGST3O14880 152 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 TUSC2O75896 110 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 CYB5R3P00387 301 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 TFF1P04155 84 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 GIPP09681 153 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 MUC1P15941 1255 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 ERP29P30040 261 aaKnown RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 CD80P33681 288 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 RBMXP38159 391 aaKnown RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 GZMKP49863 264 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms