RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 OR56B4Q8NH76 319 aa13.83□□□□□ -0.2
PRKN-209ENST00000612485 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
PRKN-209ENST00000612485 PGLYRP3Q96LB9 341 aa13.83□□□□□ -0.2
PRKN-209ENST00000612485 CNOT2Q9NZN8 540 aaKnown RBP13.83□□□□□ -0.2
PRKN-209ENST00000612485 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.2
PRKN-209ENST00000612485 TSSC4Q9Y5U2 329 aaPredicted RBP13.83□□□□□ -0.2
PRKN-209ENST00000612485 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 A0A1W2PPI3 338 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 A0A1W2PRX2 142 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
PRKN-209ENST00000612485 PF4V1P10720 104 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 CAPGP40121 348 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 RPS11P62280 158 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRKN-209ENST00000612485 HES1Q14469 280 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 DRAM1Q8N682 238 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
PRKN-209ENST00000612485 TRAV8-7A0A075B6U6 113 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 TRBV5-7A0A0A0MS05 114 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 A0A1W2PP11 408 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 SH2D7A6NKC9 451 aaPredicted RBP13.81□□□□□ -0.2
PRKN-209ENST00000612485 MYL12BO14950 172 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 TMEM11P17152 192 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 OXLD1Q5BKU9 147 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 CDH26Q8IXH8 852 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 JAGN1Q8N5M9 183 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 MUL1Q969V5 352 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 MRPS24Q96EL2 167 aaKnown RBP13.81□□□□□ -0.2
PRKN-209ENST00000612485 OR14A2Q96R54 314 aa13.81□□□□□ -0.2
PRKN-209ENST00000612485 MRPS28Q9Y2Q9 187 aaKnown RBP13.81□□□□□ -0.2
PRKN-209ENST00000612485 PNMA8CA0A1B0GUJ8 204 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 ORC5O43913 435 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 CD1AP06126 327 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 CD33P20138 364 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 DIAPH2-AS1Q14236 149 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 GLIPR1L1Q6UWM5 242 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 ZNF497Q6ZNH5 498 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 CCDC107Q8WV48 283 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 THRSPQ92748 146 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 MYDGFQ969H8 173 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 RAB9BQ9NP90 201 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 PSORS1C1Q9UIG5 152 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 DNAH3Q8TD57 4116 aa13.8□□□□□ -0.2
PRKN-209ENST00000612485 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 H0YHG0 523 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 C15orf65H3BRN8 121 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 AIPO00170 330 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 SDCBPO00560 298 aaPredicted RBP13.79□□□□□ -0.2
PRKN-209ENST00000612485 HSD17B6O14756 317 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 FGF16O43320 207 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 PF4P02776 101 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 MT-ND4P03905 459 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
PRKN-209ENST00000612485 GNAO1P09471 354 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 IL3RAP26951 378 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 WNT4P56705 351 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
PRKN-209ENST00000612485 DOC2BQ14184 412 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 AWAT2Q6E213 333 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 AHSA2Q719I0 299 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 WFDC9Q8NEX5 89 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 DERL3Q96Q80 235 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 NECAP2Q9NVZ3 263 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 GFOD1Q9NXC2 390 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
PRKN-209ENST00000612485 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
PRKN-209ENST00000612485 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 CCRL2O00421 344 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 IGKV1D-33P01593 117 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 IGKV1-33P01594 117 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 PRB2P02812 416 aaPredicted RBP13.78□□□□□ -0.2
PRKN-209ENST00000612485 MAS1P04201 325 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 CELP19835 753 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
PRKN-209ENST00000612485 HNF4GQ14541 408 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 Q3ZCU0 254 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 LAIR2Q6ISS4 152 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 MOB3BQ86TA1 216 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 NKAIN3Q8N8D7 197 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 C5orf56Q8N8D9 126 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 BPIFB6Q8NFQ5 453 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 FBLIM1Q8WUP2 373 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 SGCDQ92629 289 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 VCXQ9H320 206 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 ETAA1Q9NY74 926 aa13.78□□□□□ -0.2
PRKN-209ENST00000612485 IGHV1-3A0A0C4DH29 117 aa13.77□□□□□ -0.21
PRKN-209ENST00000612485 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
PRKN-209ENST00000612485 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms