RNA–Protein interactions for RNA: ENST00000612195.4

TVP23A-210, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TVP23A, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-210ENST00000612195 FAM118AQ9NWS6 357 aa13.13□□□□□ -0.31
TVP23A-210ENST00000612195 SNTNA6NMZ2 147 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 MAGEB3O15480 346 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
TVP23A-210ENST00000612195 GZMHP20718 246 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
TVP23A-210ENST00000612195 KIR2DS1Q14954 304 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
TVP23A-210ENST00000612195 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 Q8N9W7 124 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 OR8U1Q8NH10 309 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 GON7Q9BXV9 100 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 ORC6Q9Y5N6 252 aa13.12□□□□□ -0.31
TVP23A-210ENST00000612195 C15orf65H3BRN8 121 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 MPZL2O60487 215 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 CDRT1O95170 752 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 ECI1P42126 302 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 SOX2P48431 317 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 FOXE3Q13461 319 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 CCDC107Q8WV48 283 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 RBMXL1Q96E39 390 aaKnown RBP13.11□□□□□ -0.31
TVP23A-210ENST00000612195 MYCBPQ99417 103 aaPredicted RBP13.11□□□□□ -0.31
TVP23A-210ENST00000612195 ASCL2Q99929 193 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
TVP23A-210ENST00000612195 TMEM30CPA0ZSE6 113 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 SEC14L6B5MCN3 397 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 SDCBPO00560 298 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 EI24O14681 340 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 OR7C1O76099 320 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 ELANEP08246 267 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 GABRB1P18505 474 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 RASSF2P50749 326 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 GBX2P52951 348 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 LINC00311Q8N616 119 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 OR52M1Q8NGK5 317 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 PYDC1Q8WXC3 89 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 RGP1Q92546 391 aaPredicted RBP13.1□□□□□ -0.31
TVP23A-210ENST00000612195 ST6GALNAC6Q969X2 333 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 S1PR3Q99500 378 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 HSPB9Q9BQS6 159 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 IFT22Q9H7X7 185 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 AMBNQ9NP70 447 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 ERVK13-1Q9NX77 482 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 GFOD1Q9NXC2 390 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 ING4Q9UNL4 249 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 SACSQ9NZJ4 4579 aa13.1□□□□□ -0.31
TVP23A-210ENST00000612195 IGHV3-43A0A0B4J1X8 118 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 GEMIN2O14893 280 aaKnown RBP13.09□□□□□ -0.31
TVP23A-210ENST00000612195 FADS2O95864 444 aaKnown RBP13.09□□□□□ -0.31
TVP23A-210ENST00000612195 MOSP00540 346 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 IGHV3-43DP0DP04 118 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 CD1BP29016 333 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
TVP23A-210ENST00000612195 RBM11P57052 281 aaKnown RBP13.09□□□□□ -0.31
TVP23A-210ENST00000612195 CFHR3Q02985 330 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 MRPL28Q13084 256 aaKnown RBP13.09□□□□□ -0.31
TVP23A-210ENST00000612195 C8orf31Q8N9H6 132 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 OR52N1Q8NH53 320 aa13.09□□□□□ -0.31
TVP23A-210ENST00000612195 SLC31A2O15432 143 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 RRP9O43818 475 aaKnown RBP13.08□□□□□ -0.32
TVP23A-210ENST00000612195 ORC5O43913 435 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 IL3RAP26951 378 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 ALDH3A2P51648 485 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 F2RL1P55085 397 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 NHLRC3Q5JS37 347 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 ATAD3CQ5T2N8 411 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 METTL9Q9H1A3 318 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 IL36GQ9NZH8 169 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 GMPPBQ9Y5P6 360 aa13.08□□□□□ -0.32
TVP23A-210ENST00000612195 SORL1Q92673 2214 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 IGHG4P01861 327 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 MT-ND4P03905 459 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 CSTBP04080 98 aaKnown RBP13.07□□□□□ -0.32
TVP23A-210ENST00000612195 SERPINA2P20848 420 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 VDAC1P21796 283 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 SOX6P35712 828 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 ZNF93P35789 620 aaPredicted RBP13.07□□□□□ -0.32
TVP23A-210ENST00000612195 RAB40BQ12829 278 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 FHL3Q13643 280 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 ZNF260Q3ZCT1 412 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 FAM71E2Q8N5Q1 922 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 OR52I1Q8NGK6 324 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 Q96MT0 163 aa13.07□□□□□ -0.32
TVP23A-210ENST00000612195 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms