RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 OR56B4Q8NH76 319 aa13.83□□□□□ -0.2
PRKN-208ENST00000610470 NEK7Q8TDX7 302 aa13.83□□□□□ -0.2
PRKN-208ENST00000610470 PGLYRP3Q96LB9 341 aa13.83□□□□□ -0.2
PRKN-208ENST00000610470 CNOT2Q9NZN8 540 aaKnown RBP13.83□□□□□ -0.2
PRKN-208ENST00000610470 ZNF581Q9P0T4 197 aa13.83□□□□□ -0.2
PRKN-208ENST00000610470 TSSC4Q9Y5U2 329 aaPredicted RBP13.83□□□□□ -0.2
PRKN-208ENST00000610470 TRAV39A0A0B4J263 110 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 A0A1W2PPI3 338 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 A0A1W2PRX2 142 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 TCRBV4S1A1TA0A5B7 111 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 SNRNP70P08621 437 aaKnown RBP13.82□□□□□ -0.2
PRKN-208ENST00000610470 PF4V1P10720 104 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 CAPGP40121 348 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 RPS11P62280 158 aaKnown RBP eCLIP13.82□□□□□ -0.2
PRKN-208ENST00000610470 HES1Q14469 280 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 DRAM1Q8N682 238 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 SPACA1Q9HBV2 294 aa13.82□□□□□ -0.2
PRKN-208ENST00000610470 TRAV8-7A0A075B6U6 113 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 TRBV5-7A0A0A0MS05 114 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 A0A1W2PP11 408 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 SH2D7A6NKC9 451 aaPredicted RBP13.81□□□□□ -0.2
PRKN-208ENST00000610470 MYL12BO14950 172 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 TMEM11P17152 192 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 OXLD1Q5BKU9 147 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 CDH26Q8IXH8 852 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 JAGN1Q8N5M9 183 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 MUL1Q969V5 352 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 MRPS24Q96EL2 167 aaKnown RBP13.81□□□□□ -0.2
PRKN-208ENST00000610470 OR14A2Q96R54 314 aa13.81□□□□□ -0.2
PRKN-208ENST00000610470 MRPS28Q9Y2Q9 187 aaKnown RBP13.81□□□□□ -0.2
PRKN-208ENST00000610470 PNMA8CA0A1B0GUJ8 204 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 A0A1W2PPK0 400 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 ORC5O43913 435 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 CD1AP06126 327 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 CD33P20138 364 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 DIAPH2-AS1Q14236 149 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 GLIPR1L1Q6UWM5 242 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 ZNF497Q6ZNH5 498 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 CCDC107Q8WV48 283 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 THRSPQ92748 146 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 MYDGFQ969H8 173 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 RAB9BQ9NP90 201 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 PSORS1C1Q9UIG5 152 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 DNAH3Q8TD57 4116 aa13.8□□□□□ -0.2
PRKN-208ENST00000610470 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 MCRIP1C9JLW8 97 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 H0YHG0 523 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 C15orf65H3BRN8 121 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 AIPO00170 330 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 SDCBPO00560 298 aaPredicted RBP13.79□□□□□ -0.2
PRKN-208ENST00000610470 HSD17B6O14756 317 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 FGF16O43320 207 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 PF4P02776 101 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 MT-ND4P03905 459 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
PRKN-208ENST00000610470 GNAO1P09471 354 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 IL3RAP26951 378 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 WNT4P56705 351 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 ZNF816Q0VGE8 651 aaPredicted RBP13.79□□□□□ -0.2
PRKN-208ENST00000610470 DOC2BQ14184 412 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 AWAT2Q6E213 333 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 AHSA2Q719I0 299 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 WFDC9Q8NEX5 89 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 DERL3Q96Q80 235 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 NECAP2Q9NVZ3 263 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 GFOD1Q9NXC2 390 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
PRKN-208ENST00000610470 NOTCH3Q9UM47 2321 aa13.79□□□□□ -0.2
PRKN-208ENST00000610470 PSMB11A5LHX3 300 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 CCRL2O00421 344 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 IGKV1D-33P01593 117 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 IGKV1-33P01594 117 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 PRB2P02812 416 aaPredicted RBP13.78□□□□□ -0.2
PRKN-208ENST00000610470 MAS1P04201 325 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 CELP19835 753 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
PRKN-208ENST00000610470 HNF4GQ14541 408 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 Q3ZCU0 254 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 LAIR2Q6ISS4 152 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 MOB3BQ86TA1 216 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 NKAIN3Q8N8D7 197 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 C5orf56Q8N8D9 126 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 BPIFB6Q8NFQ5 453 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 FBLIM1Q8WUP2 373 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 NRG4Q8WWG1 115 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 SGCDQ92629 289 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 VCXQ9H320 206 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 ETAA1Q9NY74 926 aa13.78□□□□□ -0.2
PRKN-208ENST00000610470 IGHV1-3A0A0C4DH29 117 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 FAM90A10PA6NDY2 464 aa13.77□□□□□ -0.21
PRKN-208ENST00000610470 FAM90A7PA6NKC0 464 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms