RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 SOX15O60248 233 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 CLDN15P56746 228 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 HIST2H3PS2Q5TEC6 136 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 SPINK14Q6IE38 97 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 Q6ZRM9 215 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 TVP23CQ96ET8 276 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 LYRM2Q9NU23 88 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-216ENST00000610401 DECR2Q9NUI1 292 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 RNF150Q9ULK6 438 aa17.5■□□□□ 0.39
SSBP3-216ENST00000610401 PRDX4Q13162 271 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 HIKESHIQ53FT3 197 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 KHDC3LQ587J8 217 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF385CQ66K41 422 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-216ENST00000610401 SSX7Q7RTT5 188 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 COMMD1Q8N668 190 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF552Q9H707 407 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-216ENST00000610401 OR1A1Q9P1Q5 309 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF816-ZNF321PA0A0X1KG74 233 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 hCG_38984A0A1B0GV85 526 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 HOXA5P20719 270 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 RAC1P63000 192 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 DAZAP2Q15038 168 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-216ENST00000610401 ADIRFQ15847 76 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 RPUSD4Q96CM3 377 aaKnown RBP17.49■□□□□ 0.39
SSBP3-216ENST00000610401 SLC25A31Q9H0C2 315 aa17.49■□□□□ 0.39
SSBP3-216ENST00000610401 IGLV3-32A0A0A0MS00 114 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 IGHV1-45A0A0A0MS14 117 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 VAMP5O95183 116 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 P04436 131 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 FGF23Q9GZV9 251 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-216ENST00000610401 MTCH1Q9NZJ7 389 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 CACNG5Q9UF02 275 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 GAB2Q9UQC2 676 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 A0A1B0GV90 55 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 PLPPR2Q96GM1 343 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 TUBA4BQ9H853 241 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 CELA3AP09093 270 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 CDX1P47902 265 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-216ENST00000610401 MRPL21Q7Z2W9 205 aaKnown RBP17.48■□□□□ 0.39
SSBP3-216ENST00000610401 LFNGQ8NES3 379 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 HES7Q9BYE0 225 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 PRRG4Q9BZD6 226 aa17.48■□□□□ 0.39
SSBP3-216ENST00000610401 TUSC2O75896 110 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 COX6A1P12074 109 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 RTP5Q14D33 572 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 STX12Q86Y82 276 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 LILRB2Q8N423 598 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 FAM210BQ96KR6 192 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 IFNA5P01569 189 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 ERVS71-1P61550 626 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 ARF1P84077 181 aaKnown RBP17.47■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF787Q6DD87 383 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 IFI44Q8TCB0 444 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 ABHD5Q8WTS1 349 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 GPR146Q96CH1 333 aa17.47■□□□□ 0.39
SSBP3-216ENST00000610401 PHOX2AO14813 284 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 PITX3O75364 302 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 MLF1P58340 268 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 RAB1AP62820 205 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ARL16Q0P5N6 197 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ZDHHC23Q8IYP9 409 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 CLDND2Q8NHS1 167 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 TAAR3PQ9P1P4 343 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF503-AS2A6NEH8 195 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 FAM166BA8MTA8 275 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 IFNL4K9M1U5 179 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 CBR3O75828 277 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 DKK1O94907 266 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 TFF1P04155 84 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 MRPL14Q6P1L8 145 aaKnown RBP17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF600Q6ZNG1 722 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 WDR5BQ86VZ2 330 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 SCGB1C1Q8TD33 95 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 RBMXL1Q96E39 390 aaKnown RBP17.46■□□□□ 0.39
SSBP3-216ENST00000610401 SIGLEC12Q96PQ1 595 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 GPR35Q9HC97 309 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 KIAA1456Q9P272 454 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 PINLYPA6NC86 204 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ZNF705GA8MUZ8 300 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-216ENST00000610401 TRAPPC2LH3BP13 241 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 GALR2O43603 387 aaPredicted RBP17.46■□□□□ 0.39
SSBP3-216ENST00000610401 RAC3P60763 192 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 HIST1H3AP68431 136 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 HLA-DRB3P79483 266 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 C12orf49Q9H741 205 aa17.46■□□□□ 0.39
SSBP3-216ENST00000610401 ROS1P08922 2347 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 MED12LQ86YW9 2145 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 SPENQ96T58 3664 aaKnown RBP17.45■□□□□ 0.38
SSBP3-216ENST00000610401 C9J4A7 227 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 SIRPB1O00241 398 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 PGLYRP1O75594 196 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-216ENST00000610401 RHBDL1O75783 438 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 PAX6P26367 422 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 GPX4P36969 197 aaPredicted RBP17.45■□□□□ 0.38
SSBP3-216ENST00000610401 TLE4Q04727 773 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 SPIN2AQ99865 258 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 SPIN2BQ9BPZ2 258 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 DEPPQ9NTK1 212 aa17.45■□□□□ 0.38
SSBP3-216ENST00000610401 NOSIPQ9Y314 301 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms