RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 Q8IYB0 196 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF645Q8N7E2 425 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 DNAAF1Q8NEP3 725 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 BBS1Q8NFJ9 593 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 UTP4Q969X6 686 aaKnown RBP6.95□□□□□ -1.3
CTCFL-220ENST00000608858 TMEM106AQ96A25 262 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 CLCC1Q96S66 551 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 RANGRFQ9HD47 186 aaPredicted RBP6.95□□□□□ -1.3
CTCFL-220ENST00000608858 CNOT2Q9NZN8 540 aaKnown RBP6.95□□□□□ -1.3
CTCFL-220ENST00000608858 MRM2Q9UI43 246 aaKnown RBP6.95□□□□□ -1.3
CTCFL-220ENST00000608858 FOXA2Q9Y261 457 aaPredicted RBP6.95□□□□□ -1.3
CTCFL-220ENST00000608858 ERGIC3Q9Y282 383 aa6.95□□□□□ -1.3
CTCFL-220ENST00000608858 NPIPB11E5RHQ5 1161 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 LOC110117498-PIK3R3F6TDL0 507 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 RTL8CO15255 209 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 SPRY2O43597 315 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 RPP14O95059 124 aaKnown RBP6.94□□□□□ -1.3
CTCFL-220ENST00000608858 EGR2P11161 476 aaPredicted RBP6.94□□□□□ -1.3
CTCFL-220ENST00000608858 VHLP40337 213 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 RIDAP52758 137 aaKnown RBP6.94□□□□□ -1.3
CTCFL-220ENST00000608858 ATP1B3P54709 279 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 ACTBP60709 375 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 NDPQ00604 133 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 UNQ5815/PRO19632Q6UWF5 114 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 CPOQ8IVL8 374 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 Q8N3U1 123 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 AQP11Q8NBQ7 271 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 OR5D18Q8NGL1 313 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 CCDC107Q8WV48 283 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 PYURFQ96I23 114 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 RDH12Q96NR8 316 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 KCTD14Q9BQ13 255 aaPredicted RBP6.94□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF251Q9BRH9 671 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 CMC2Q9NRP2 79 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 KRT84Q9NSB2 600 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF580Q9UK33 172 aa6.94□□□□□ -1.3
CTCFL-220ENST00000608858 IGLL5B9A064 214 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 TNFRSF11BO00300 401 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 SDCBPO00560 298 aaPredicted RBP6.93□□□□□ -1.3
CTCFL-220ENST00000608858 SERPINA3P01011 423 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 TRBV12-3P01733 135 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 EDN2P20800 178 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ZP3P21754 424 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 RBP2P50120 134 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 MECP2P51608 486 aaKnown RBP6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF134P52741 427 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 CX3CL1P78423 397 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF45Q02386 682 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 PDZK1IP1Q13113 114 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ACTBL2Q562R1 376 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 C19orf54Q5BKX5 351 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 COQ5Q5HYK3 327 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 ZNF679Q8IYX0 411 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 LFNGQ8NES3 379 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 OR5T1Q8NG75 326 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 WDR89Q96FK6 387 aaPredicted RBP6.93□□□□□ -1.3
CTCFL-220ENST00000608858 GGTLC1Q9BX51 225 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 BARHL1Q9BZE3 327 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 PARP12Q9H0J9 701 aaKnown RBP6.93□□□□□ -1.3
CTCFL-220ENST00000608858 BAIAP2Q9UQB8 552 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 GAB2Q9UQC2 676 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 NUBP2Q9Y5Y2 271 aa6.93□□□□□ -1.3
CTCFL-220ENST00000608858 LOC102724200A0A096LPH7 203 aaPredicted RBP6.92□□□□□ -1.3
CTCFL-220ENST00000608858 IGKV1-9A0A0C4DH69 117 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 C13orf42A0A1B0GVH6 325 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 BBIP1A8MTZ0 92 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 H0YJX3 145 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 H3BN98 237 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 SRSF10O75494 262 aaKnown RBP6.92□□□□□ -1.3
CTCFL-220ENST00000608858 CCNB2O95067 398 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 NDUFB8O95169 186 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 HLA-DRB1P01911 266 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 IFNA4P05014 189 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 APOFQ13790 326 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 CDK5R1Q15078 307 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 RBMY1FQ15415 496 aaKnown RBP6.92□□□□□ -1.3
CTCFL-220ENST00000608858 TATDN3Q17R31 274 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 C5orf64Q2M2E5 130 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 PAN3Q58A45 887 aaKnown RBP6.92□□□□□ -1.3
CTCFL-220ENST00000608858 METTL21CQ5VZV1 264 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 FAHD1Q6P587 224 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 DEGS2Q6QHC5 323 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 SLC16A12Q6ZSM3 486 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 OR51T1Q8NGJ9 327 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 ARL11Q969Q4 196 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 MCUR1Q96AQ8 359 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 TLCD1Q96CP7 247 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 FBXL15Q9H469 300 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 NEK6Q9HC98 313 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 SAR1AQ9NR31 198 aa6.92□□□□□ -1.3
CTCFL-220ENST00000608858 FAM118AQ9NWS6 357 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms