RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SUMF2Q8NBJ7 301 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 OR10A7Q8NGE5 316 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 CCDC107Q8WV48 283 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 ARL11Q969Q4 196 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 EAF1Q96JC9 268 aaPredicted RBP11.71□□□□□ -0.53
CTSA-216ENST00000607212 ASCL2Q99929 193 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 METTL9Q9H1A3 318 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
CTSA-216ENST00000607212 ST3GAL6Q9Y274 331 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 GMPPBQ9Y5P6 360 aa11.71□□□□□ -0.53
CTSA-216ENST00000607212 IGHV3-43A0A0B4J1X8 118 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 SEC14L6B5MCN3 397 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 NPIPB11E5RHQ5 1161 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 J3QRE1 110 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 EI24O14681 340 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 CDRT1O95170 752 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 FADS2O95864 444 aaKnown RBP11.7□□□□□ -0.54
CTSA-216ENST00000607212 CD2P06729 351 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 IGHV3-43DP0DP04 118 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 SERPINA2P20848 420 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 VDAC1P21796 283 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 PPP3R1P63098 170 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 ZNF816Q0VGE8 651 aaPredicted RBP11.7□□□□□ -0.54
CTSA-216ENST00000607212 MRPL28Q13084 256 aaKnown RBP11.7□□□□□ -0.54
CTSA-216ENST00000607212 SLC16A12Q6ZSM3 486 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 TGIF2LXQ8IUE1 241 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 PARP16Q8N5Y8 322 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 OR51A2Q8NGJ7 313 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 PYDC1Q8WXC3 89 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
CTSA-216ENST00000607212 EXOGQ9Y2C4 368 aaKnown RBP11.7□□□□□ -0.54
CTSA-216ENST00000607212 ATP5HO75947 161 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 GZMHP20718 246 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 RIPK1Q13546 671 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 SYS1Q8N2H4 156 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 STX19Q8N4C7 294 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 Q96MT0 163 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 ABCG5Q9H222 651 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 AMBNQ9NP70 447 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 LIN7CQ9NUP9 197 aaKnown RBP11.69□□□□□ -0.54
CTSA-216ENST00000607212 NBEAL2Q6ZNJ1 2754 aa11.69□□□□□ -0.54
CTSA-216ENST00000607212 E9PI62 339 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 MOSP00540 346 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 KLHL22Q53GT1 634 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 SLC25A30Q5SVS4 291 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 DDI2Q5TDH0 399 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 IZUMO1Q8IYV9 350 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 OR52N1Q8NH53 320 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 LINC00574Q9H8X3 128 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 GFOD1Q9NXC2 390 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 GNG12Q9UBI6 72 aa11.68□□□□□ -0.54
CTSA-216ENST00000607212 AIPO00170 330 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 GEMIN2O14893 280 aaKnown RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 ATP6V1G2O95670 118 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 ALPLP05186 524 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 ELANEP08246 267 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 ZNF93P35789 620 aaPredicted RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 ALDH3A2P51648 485 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 FOXE3Q13461 319 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 KIR2DS1Q14954 304 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 ZNF260Q3ZCT1 412 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 PRR18Q8N4B5 295 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 Q8N9W7 124 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 GPR148Q8TDV2 347 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 S1PR3Q99500 378 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 PAK1IP1Q9NWT1 392 aaPredicted RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 ZNF581Q9P0T4 197 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
CTSA-216ENST00000607212 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 KMT2CQ8NEZ4 4911 aaKnown RBP11.67□□□□□ -0.54
CTSA-216ENST00000607212 MYF6P23409 242 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 CD1BP29016 333 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 SOX6P35712 828 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 GTF2A1P52655 376 aaPredicted RBP11.66□□□□□ -0.54
CTSA-216ENST00000607212 EBI3Q14213 229 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 SLC22A6Q4U2R8 563 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 TMEM65Q6PI78 240 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 RTN4IP1Q8WWV3 396 aaPredicted RBP11.66□□□□□ -0.54
CTSA-216ENST00000607212 TMEM106AQ96A25 262 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
CTSA-216ENST00000607212 COL7A1Q02388 2944 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 SPINT2O43291 252 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 OR5H8P0DN80 308 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 SLC2A2P11168 524 aaPredicted RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 BDKRB2P30411 391 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 CDX1P47902 265 aaPredicted RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 PAX5Q02548 391 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 RAB40BQ12829 278 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
CTSA-216ENST00000607212 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 CBR4Q8N4T8 237 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 OR11H1Q8NG94 326 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 OR52M1Q8NGK5 317 aa11.65□□□□□ -0.54
CTSA-216ENST00000607212 OR52I1Q8NGK6 324 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms