RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 RSPO3Q9BXY4 272 aaPredicted RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 A0A1W2PR80 420 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 GAGE12BA1L429 117 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 UNC119BA6NIH7 251 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SIRPB1O00241 398 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 FGF17O60258 216 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 EIF4EP06730 217 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 FCARP24071 287 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 PTGER1P34995 402 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 CX3CR1P49238 355 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 CAV3P56539 151 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 HIST1H3AP68431 136 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 NCBP2-AS2Q69YL0 99 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 C11orf87Q6NUJ2 197 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 Q6ZT83 130 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 C9orf139Q6ZV77 190 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SMIM5Q71RC9 77 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 MRGPRGQ86SM5 289 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 APOBEC3FQ8IUX4 373 aaKnown RBP4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 C20orf196Q8IYI0 205 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR4D9Q8NGE8 314 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 SECTM1Q8WVN6 248 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 DEFB129Q9H1M3 183 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 PARP11Q9NR21 331 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 BET1LQ9NYM9 111 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 OR51B2Q9Y5P1 312 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
SPTBN1-206ENST00000602898 GOLGB1Q14789 3259 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1B0GU03 582 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1W2PRD5 423 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A1W2PRS3 328 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 A1L4Q6 167 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 FAM220BPB1ANY3 271 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 UMAD1C9J7I0 102 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 CTSDP07339 412 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 GPR6P46095 362 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 OR12D2P58182 307 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 CLRN1P58418 232 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 GNMTQ14749 295 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 MMDQ15546 238 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 ATP6AP1LQ52LC2 224 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TNFAIP8L2Q6P589 184 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF66Q6ZN08 573 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 DTX2Q86UW9 622 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF676Q8N7Q3 588 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TSTD1Q8NFU3 115 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 OR13G1Q8NGZ3 307 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 HAVCR2Q8TDQ0 301 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 SMIM4Q8WVI0 70 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 RND1Q92730 232 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 PCED1BQ96HM7 432 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 REEP1Q9H902 201 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 PKIGQ9Y2B9 76 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 AK6Q9Y3D8 172 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 SMCHD1A6NHR9 2005 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 PLXNB2O15031 1838 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 IGSF23A1L1A6 192 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 CASTOR2A6NHX0 329 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 HCRTR1O43613 425 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 DUSP11O75319 330 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TRAPPC6AO75865 159 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 STK17BO94768 372 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 NDUFB6O95139 128 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 RPL12P30050 165 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF133P52736 654 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 WDR5P61964 334 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 RPS25P62851 125 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 RPL31P62899 125 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 MRPS6P82932 125 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 DHRS13Q6UX07 377 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TPRG1Q6ZUI0 275 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 NEU4Q8WWR8 484 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TBX15Q96SF7 602 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 CIPCQ9C0C6 399 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 TCEAL2Q9H3H9 227 aaPredicted RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 SMDT1Q9H4I9 107 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 MBNL3Q9NUK0 354 aaKnown RBP4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 FZR1Q9UM11 496 aa4.27□□□□□ -1.73
SPTBN1-206ENST00000602898 A0A0G2JNJ9 132 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 TNFRSF11BO00300 401 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 SLC31A1O15431 190 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 IFNA1P01562 189 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 EDN1P05305 212 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 CT45A8P0DMV1 189 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 CT45A9P0DMV2 189 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 OR12D1P0DN82 309 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 PRDX3P30048 256 aaKnown RBP4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 PYCR1P32322 319 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 GLRXP35754 106 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 DGCR2P98153 550 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 ZNF154Q13106 437 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 LTC4SQ16873 150 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 CT45A2Q5DJT8 189 aa4.26□□□□□ -1.73
SPTBN1-206ENST00000602898 AADACL3Q5VUY0 350 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms