RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 C6orf183Q5T699 404 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 ZNF782Q6ZMW2 699 aaPredicted RBP11.32□□□□□ -0.6
RNF40-212ENST00000602784 PDZD9Q8IXQ8 264 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
RNF40-212ENST00000602784 OR10R2Q8NGX6 335 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 LGALS14Q8TCE9 139 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 MRGPRDQ8TDS7 321 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 RAB2BQ8WUD1 216 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
RNF40-212ENST00000602784 RAB3CQ96E17 227 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 ARHGAP5-AS1Q96IT6 56 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 SLC6A7Q99884 636 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 PECRQ9BY49 303 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 RAB9BQ9NP90 201 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 MBNL3Q9NUK0 354 aaKnown RBP11.32□□□□□ -0.6
RNF40-212ENST00000602784 TRAPPC2LQ9UL33 140 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 SPATA2Q9UM82 520 aa11.32□□□□□ -0.6
RNF40-212ENST00000602784 ATRQ13535 2644 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 A0A0A6YYH2 397 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 A6NJ64 397 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 C15orf65H3BRN8 121 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 TCF21O43680 179 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 MMP23AO75900 390 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 PAHP00439 452 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
RNF40-212ENST00000602784 DYNC1I2Q13409 638 aaKnown RBP11.31□□□□□ -0.6
RNF40-212ENST00000602784 TMEM30BQ3MIR4 351 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 PRAMEF5Q5TYX0 476 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 RUSC1-AS1Q66K80 236 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 RBMS3Q6XE24 437 aaKnown RBP11.31□□□□□ -0.6
RNF40-212ENST00000602784 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 PRIMA1Q86XR5 153 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 PNKDQ8N490 385 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 MRPL30Q8TCC3 161 aaKnown RBP11.31□□□□□ -0.6
RNF40-212ENST00000602784 CCDC107Q8WV48 283 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 KIRREL1Q96J84 757 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 IDI2-AS1Q9NZ38 188 aa11.31□□□□□ -0.6
RNF40-212ENST00000602784 IGHV2-26A0A0B4J1V2 119 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 TRAV39A0A0B4J263 110 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 MEIOCA2RUB1 952 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 F2RL2O00254 374 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 SPINT2O43291 252 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 RCC1P18754 421 aaPredicted RBP11.3□□□□□ -0.6
RNF40-212ENST00000602784 COX7A1P24310 79 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 SSTR5P35346 364 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 SAA4P35542 130 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 RORCP51449 518 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 HILS1P60008 231 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 MOGAT2Q3SYC2 334 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 MOB1BQ7L9L4 216 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 CLVS1Q8IUQ0 354 aaPredicted RBP11.3□□□□□ -0.6
RNF40-212ENST00000602784 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 SIGLECL1Q8N7X8 197 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 OR5H6Q8NGV6 325 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 ARL11Q969Q4 196 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 DCSTAMPQ9H295 470 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 C12orf4Q9NQ89 552 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.3□□□□□ -0.6
RNF40-212ENST00000602784 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 KCNIP1Q9NZI2 227 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 AK3Q9UIJ7 227 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 MGAT4AQ9UM21 535 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 KCNK7Q9Y2U2 307 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
RNF40-212ENST00000602784 A0A0U1RQK1 487 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 C12orf77C9JDV5 145 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 MFNGO00587 321 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 FBP1P09467 338 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 HIST1H1DP16402 221 aaKnown RBP11.29□□□□□ -0.6
RNF40-212ENST00000602784 OMGP23515 440 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 GDNFP39905 211 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 LGALS4P56470 323 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 Q3ZCU0 254 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 BEND2Q8NDZ0 799 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 RFESDQ8TAC1 157 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 ACOT12Q8WYK0 555 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 CYYR1Q96J86 154 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 ZNF48Q96MX3 618 aaPredicted RBP11.29□□□□□ -0.6
RNF40-212ENST00000602784 ABCG5Q9H222 651 aa11.29□□□□□ -0.6
RNF40-212ENST00000602784 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
RNF40-212ENST00000602784 SOX21Q9Y651 276 aaPredicted RBP11.29□□□□□ -0.6
RNF40-212ENST00000602784 CLDN34H7C241 214 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 IGLV1-47P01700 117 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 ARG1P05089 322 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 GSTP1P09211 210 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms