RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 MED12LQ86YW9 2145 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CD226Q15762 336 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 WIPI1Q5MNZ9 446 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-217ENST00000602723 ZG16BQ96DA0 208 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 MRM2Q9UI43 246 aaKnown RBP8.48□□□□□ -1.05
CSMD1-217ENST00000602723 ADAP1O75689 374 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 MRGPRGQ86SM5 289 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 OR10D3Q8NH80 312 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 TNXAQ16473 311 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 LGALSLQ3ZCW2 172 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-217ENST00000602723 ZFP30Q9Y2G7 519 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 FAM157AC9JC47 383 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CCR2P41597 374 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 MYOZ3Q8TDC0 251 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM238LA0A1B0GVL6 79 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 A6NJY4 79 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 HTN1P15515 57 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 PHF7Q9BWX1 381 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-217ENST00000602723 SERTM1A2A2V5 107 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 SCGB1A1P11684 91 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CST9Q5W186 159 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 GBGT1Q8N5D6 347 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 MFSD2BA6NFX1 497 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CDC42EP2O14613 210 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 FAM157CP0CG43 387 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CCL2P13500 99 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 C10orf113Q5VZT2 155 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 C16orf82Q7Z2V1 217 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 GAPTQ8N292 157 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 OR4P4Q8NGL7 312 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 PLA2G3Q9NZ20 509 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 UBR3Q6ZT12 1888 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 RNF224P0DH78 156 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 VDAC1P21796 283 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 PMELP40967 661 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF345Q14585 488 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 RTN4RL1Q86UN2 441 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CYB561D1Q8N8Q1 229 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 CXXC4Q9H2H0 198 aa8.48□□□□□ -1.05
CSMD1-217ENST00000602723 TRAV17A0A0B4J275 112 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 PITX3O75364 302 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 MGPP08493 103 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 OR6X1Q8NH79 312 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 VSIG4Q9Y279 399 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 CTSVO60911 334 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 LYZL6O75951 148 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 FABP2P12104 132 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 CEACAM3P40198 252 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF738Q8NE65 137 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 OR1K1Q8NGR3 316 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 MRGPRFQ96AM1 343 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 RAB37Q96AX2 223 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 CLDN18P56856 261 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 FZD5Q13467 585 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 V9GYH0 126 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 MYF5P13349 255 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 GLULP15104 373 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 FAM3BP58499 235 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-217ENST00000602723 SMUG1Q53HV7 270 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 TMEM255AQ5JRV8 349 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 GPR61Q9BZJ8 451 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 RAB33BQ9H082 229 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 IGLV3-16A0A075B6K0 115 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 A0A1B0GU03 582 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-217ENST00000602723 BRCA1P38398 1863 aaKnown RBP8.47□□□□□ -1.05
CSMD1-217ENST00000602723 CXorf51AA0A1B0GTR3 108 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 NKX2-6A6NCS4 301 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 PTPRQQ9UMZ3 2332 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 ZNF250P15622 560 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 NMUP48645 174 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 SSX8Q7RTT4 187 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 OR11H7Q8NGC8 314 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 TMPRSS2O15393 492 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 FOXO1Q12778 655 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 PRICKLE4Q2TBC4 344 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 STXBP6Q8NFX7 210 aa8.47□□□□□ -1.05
CSMD1-217ENST00000602723 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 OR4C12Q96R67 309 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 SPTY2D1-AS1A0A0U1RR47 76 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.46□□□□□ -1.05
CSMD1-217ENST00000602723 SNURFLB1AK76 121 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 GNG7O60262 68 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 OR8I2Q8N0Y5 310 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 KCNE1BA0A087WTH5 132 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 CTDSPLO15194 276 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 PWWP2BQ6NUJ5 590 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 C10orf35Q96D05 121 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 MRGPRX3Q96LB0 322 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 PRNDQ9UKY0 176 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 CUL9Q8IWT3 2517 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 CTXND1A0A1B0GTU2 59 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 F2RL2O00254 374 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 MPZL1O95297 269 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 CA2P00918 260 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 GABRA6Q16445 453 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 LRRC75AQ8NAA5 344 aa8.46□□□□□ -1.05
CSMD1-217ENST00000602723 IFITM10A6NMD0 228 aa8.46□□□□□ -1.06
CSMD1-217ENST00000602723 SRP14P37108 136 aaKnown RBP8.46□□□□□ -1.06
CSMD1-217ENST00000602723 KLF9Q13886 244 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms