RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 SLC35E1Q96K37 410 aa9.11□□□□□ -0.95
LIG1-220ENST00000601091 GNRHR2Q96P88 292 aa9.11□□□□□ -0.95
LIG1-220ENST00000601091 NMES1Q9C002 83 aa9.11□□□□□ -0.95
LIG1-220ENST00000601091 CHRNA10Q9GZZ6 450 aa9.11□□□□□ -0.95
LIG1-220ENST00000601091 LMX1BO60663 402 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 SNRNP200O75643 2136 aaKnown RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 NRASP01111 189 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 FOLR2P14207 255 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 PIGPP57054 158 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 PAX5Q02548 391 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 KCNIP4Q6PIL6 250 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 YRDCQ86U90 279 aaKnown RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 TDHQ8IZJ6 230 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 OR5AP2Q8NGF4 316 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 SECTM1Q8WVN6 248 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 RTN4IP1Q8WWV3 396 aaPredicted RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 ZNF501Q96CX3 271 aaPredicted RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 PLK3Q9H4B4 646 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 PRUNE2Q8WUY3 3088 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 TRAPPC2LH3BP13 241 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 ANGPTL7O43827 346 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 LRP3O75074 770 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 CEACAM1P13688 526 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 ZBTB25P24278 435 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 PPIAP62937 165 aaKnown RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 PJVKQ0ZLH3 352 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 GFI1BQ5VTD9 330 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 FNDC7Q5VTL7 733 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 IL34Q6ZMJ4 242 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 Q6ZRG5 221 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 FAM213BQ8TBF2 198 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 B3GAT1Q9P2W7 334 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 HSF4Q9ULV5 492 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 TIMM10BQ9Y5J6 103 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 MED19A0JLT2 244 aaPredicted RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 HSD17B6O14756 317 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 RPS18P62269 152 aaKnown RBP9.1□□□□□ -0.95
LIG1-220ENST00000601091 BAXQ07812 192 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 FHL1Q13642 323 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 C9orf135Q5VTT2 229 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 SUMF2Q8NBJ7 301 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 OR51F2Q8NH61 342 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 KCNS2Q9ULS6 477 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 NSG2Q9Y328 171 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 MMP24Q9Y5R2 645 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 KIF26BQ2KJY2 2108 aa9.1□□□□□ -0.95
LIG1-220ENST00000601091 TRAV25A0A0B4J276 109 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 DHRS7CA6NNS2 312 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 RCC1P18754 421 aaPredicted RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 DSCR4P56555 118 aaPredicted RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 OR5R1Q8NH85 324 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 AQP3Q92482 292 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 CIB3Q96Q77 187 aaPredicted RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 RASL10BQ96S79 203 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 MMP26Q9NRE1 261 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 RCC2Q9P258 522 aaKnown RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 MCTS1Q9ULC4 181 aaKnown RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 BOKQ9UMX3 212 aaPredicted RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 IGKV3D-11A0A0A0MRZ8 115 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 CD74P04233 296 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 ZNF266Q14584 549 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 C6orf201Q7Z4U5 140 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 LIN37Q96GY3 246 aaPredicted RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 WDR13Q9H1Z4 485 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 MPDZO75970 2070 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 ZNF106Q9H2Y7 1883 aaKnown RBP9.09□□□□□ -0.95
LIG1-220ENST00000601091 B4GALT1P15291 398 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 SRSF7Q16629 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
LIG1-220ENST00000601091 SOHLH1Q5JUK2 328 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 TOMM20LQ6UXN7 152 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 NTNG2Q96CW9 530 aa9.09□□□□□ -0.95
LIG1-220ENST00000601091 ANKRD30BLA7E2S9 258 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 TNFSF11O14788 317 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 PGA3P0DJD8 388 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 CHATP28329 748 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 GABRA6Q16445 453 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 LTC4SQ16873 150 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 IQCJQ1A5X6 159 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 CEACAM21Q3KPI0 293 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 OR4A47Q6IF82 309 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 WBP1Q96G27 269 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 ST3GAL6Q9Y274 331 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 RNASEK-C17orf49H0YIS7 233 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 MSTNO14793 375 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 IGHMP01871 453 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 SERPINA7P05543 415 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 TCN2P20062 427 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 MST1P26927 711 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 IKZF1Q13422 519 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 BATF2Q8N1L9 274 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 OR52L2PQ8NGH6 319 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 PSMF1Q92530 271 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 EGLN1Q9GZT9 426 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 PSG11Q9UQ72 335 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 PPIAL4AQ9Y536 164 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 MTCH2Q9Y6C9 303 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms