RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 OR2G6Q5TZ20 316 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 ETV3LQ6ZN32 361 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 PQLC1Q8N2U9 271 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 COMMD1Q8N668 190 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 OR52M1Q8NGK5 317 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 S100A13Q99584 98 aa13.43□□□□□ -0.26
SCAF1-204ENST00000601038 SIRT4Q9Y6E7 314 aaPredicted RBP13.43□□□□□ -0.26
SCAF1-204ENST00000601038 IGHV1-3A0A0C4DH29 117 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 C15orf65H3BRN8 121 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 HSD17B6O14756 317 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 GEMIN2O14893 280 aaKnown RBP13.42□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF780AO75290 641 aaPredicted RBP13.42□□□□□ -0.26
SCAF1-204ENST00000601038 SERPINA2P20848 420 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 BDKRB2P30411 391 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 SLC35B1P78383 322 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 MPV17LQ2QL34 196 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 DEFB121Q5J5C9 76 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 OR2W3Q7Z3T1 314 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 SLC35E3Q7Z769 313 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 MOB3BQ86TA1 216 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 LINC00311Q8N616 119 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF555Q8NEP9 628 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 ARL11Q969Q4 196 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 BABAM2Q9NXR7 383 aa13.42□□□□□ -0.26
SCAF1-204ENST00000601038 WI2-2373I1.2A0A1W2PRP0 233 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 IRGMA1A4Y4 181 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 CCRL2O00421 344 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 ORC5O43913 435 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 GTF2F2P13984 249 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 MYCNOSP40205 109 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 RIPK1Q13546 671 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 VAX1Q5SQQ9 334 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 ATAD3CQ5T2N8 411 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 FOXRED2Q8IWF2 684 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 IZUMO1Q8IYV9 350 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 STPG2Q8N412 459 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 C8orf31Q8N9H6 132 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 DPF1Q92782 380 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 SMIM19Q96E16 107 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 EAF1Q96JC9 268 aaPredicted RBP13.41□□□□□ -0.26
SCAF1-204ENST00000601038 RDH12Q96NR8 316 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 MCRIP2Q9BUT9 160 aaKnown RBP13.41□□□□□ -0.26
SCAF1-204ENST00000601038 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
SCAF1-204ENST00000601038 SDCBPO00560 298 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 GPX5O75715 221 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 MT-ND4P03905 459 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 IGFBP3P17936 291 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 REG1BP48304 166 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 GPR176Q14439 515 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 SLC22A6Q4U2R8 563 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 C18orf65Q6ZTR6 163 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 C8orf86Q6ZUL3 223 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 TGIF2LXQ8IUE1 241 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 Q8N6K4 173 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 OR2T10Q8NGZ9 312 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 CCDC107Q8WV48 283 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 GHSRQ92847 366 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 ST6GALNAC6Q969X2 333 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 ZNF184Q99676 751 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 GFOD1Q9NXC2 390 aa13.4□□□□□ -0.26
SCAF1-204ENST00000601038 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 DIMT1Q9UNQ2 313 aaKnown RBP13.4□□□□□ -0.26
SCAF1-204ENST00000601038 IGHV3-72A0A0B4J1Y9 119 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 TRBV5-5A0A0J9YX44 114 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 LINC01548A6NM66 108 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 NCBP2LA6PVI3 153 aaKnown RBP13.39□□□□□ -0.27
SCAF1-204ENST00000601038 NUDT19A8MXV4 375 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 MYL12AP19105 171 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 Q3ZCU0 254 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 DMKNQ6E0U4 476 aaPredicted RBP13.39□□□□□ -0.27
SCAF1-204ENST00000601038 TEX38Q6PEX7 206 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 ZNF497Q6ZNH5 498 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 STX19Q8N4C7 294 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 NEK7Q8TDX7 302 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 P2RX4Q99571 388 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 ABCG5Q9H222 651 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 LIN7CQ9NUP9 197 aaKnown RBP13.39□□□□□ -0.27
SCAF1-204ENST00000601038 CKLFQ9UBR5 152 aa13.39□□□□□ -0.27
SCAF1-204ENST00000601038 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
SCAF1-204ENST00000601038 A0A1W2PP11 408 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 AIPO00170 330 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 AP4M1O00189 453 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 LALBAP00709 142 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 IL3RAP26951 378 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 CD1BP29016 333 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 GPR12P47775 334 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 Q499Y3 187 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 YIF1BQ5BJH7 314 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 ZNF695Q8IW36 515 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 Q8N9W7 124 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 TMEM104Q8NE00 496 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 OR13C5Q8NGS8 318 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 UBALD1Q8TB05 177 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 RTN4IP1Q8WWV3 396 aaPredicted RBP13.38□□□□□ -0.27
SCAF1-204ENST00000601038 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 SPACA1Q9HBV2 294 aa13.38□□□□□ -0.27
SCAF1-204ENST00000601038 CLEC2DQ9UHP7 191 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms