RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PPIL3Q9H2H8 161 aaKnown RBP13.75□□□□□ -0.21
SSBP4-207ENST00000600244 ZCCHC4Q9H5U6 513 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 KMT2AQ03164 3969 aa13.75□□□□□ -0.21
SSBP4-207ENST00000600244 SERPINE3A8MV23 424 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 SERPINA3P01011 423 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 SPNP16150 400 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 FSTP19883 344 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 GALP22466 123 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 GNG3P63215 75 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 FABP5Q01469 135 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 TEX38Q6PEX7 206 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 DRAM1Q8N682 238 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 OR5D14Q8NGL3 314 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 TMEM203Q969S6 136 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 TMEM133Q9H2Q1 129 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 C19orf73Q9NVV2 129 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 MOB4Q9Y3A3 225 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 SESN1Q9Y6P5 492 aa13.74□□□□□ -0.21
SSBP4-207ENST00000600244 IGKV1-27A0A075B6S5 117 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 TRAV8-7A0A075B6U6 113 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF732B4DXR9 585 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 K7N7A8 449 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 TFAP2AP05549 437 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 UCHL1P09936 223 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 GP9P14770 177 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 FUT6P51993 359 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 SMIM21Q3B7S5 101 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF429Q86V71 674 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 STPG2Q8N412 459 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 RNF152Q8N8N0 203 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 POC1AQ8NBT0 407 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 PHYHIPQ92561 330 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 SPSB1Q96BD6 273 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 ORAI1Q96D31 301 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF714Q96N38 554 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 HIST1H2AAQ96QV6 131 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 SPATA25Q9BR10 227 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 MRPS26Q9BYN8 205 aaKnown RBP13.73□□□□□ -0.21
SSBP4-207ENST00000600244 VCX3AQ9NNX9 186 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 TAS2R4Q9NYW5 299 aa13.73□□□□□ -0.21
SSBP4-207ENST00000600244 TRDV1A0A1B0GX56 115 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 GABRPO00591 440 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 SULT1B1O43704 296 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 PRKACBP22694 351 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 MAPK3P27361 379 aaPredicted RBP13.72□□□□□ -0.21
SSBP4-207ENST00000600244 ALDH3B2P48448 385 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 FAM71E2Q8N5Q1 922 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 OR51A2Q8NGJ7 313 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 OR13C9Q8NGT0 318 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 YIPF6Q96EC8 236 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 ZNF488Q96MN9 340 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 NRIP2Q9BQI9 281 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 SLC7A11Q9UPY5 501 aa13.72□□□□□ -0.21
SSBP4-207ENST00000600244 ABCA13Q86UQ4 5058 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 A0A1W2PPK0 400 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 A8MZ25 164 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 SLC25A17O43808 307 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 IGHG2P01859 326 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 IGHV4-30-4P0DP06 118 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 CD37P11049 281 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 MPZP25189 248 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 FGF9P31371 208 aaPredicted RBP13.71□□□□□ -0.21
SSBP4-207ENST00000600244 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 LYPD6Q86Y78 171 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 C5orf56Q8N8D9 126 aa13.71□□□□□ -0.21
SSBP4-207ENST00000600244 FAM90A18PA6NE21 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A16PA6NEW6 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A20PA6NIJ5 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A9PA6NNJ1 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A12PA8MX19 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A5PA8MXJ8 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 MMP23AO75900 390 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A15PP0C7V4 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A13PP0C7W8 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A14PP0C7W9 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM90A24PP0C7X0 464 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 CD36P16671 472 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 RAB3AP20336 220 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 MTNR1BP49286 362 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 RBP2P50120 134 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 MEF2CQ06413 473 aaPredicted RBP13.7□□□□□ -0.22
SSBP4-207ENST00000600244 PNLIPRP3Q17RR3 467 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 HAGHLQ6PII5 290 aaPredicted RBP13.7□□□□□ -0.22
SSBP4-207ENST00000600244 ZNF573Q86YE8 665 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 Q8N1Y9 231 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 TRMT10AQ8TBZ6 339 aaKnown RBP13.7□□□□□ -0.22
SSBP4-207ENST00000600244 PKIBQ9C010 78 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 STUB1Q9UNE7 303 aa13.7□□□□□ -0.22
SSBP4-207ENST00000600244 FAM230AA0A1W2PPH8 454 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 LINC01548A6NM66 108 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 LEUTXA8MZ59 168 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 J3QT63 122 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 NOS1APO75052 506 aaPredicted RBP13.69□□□□□ -0.22
SSBP4-207ENST00000600244 ZNF737O75373 536 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 IGLV1-47P01700 117 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 EDDM3BP56851 147 aa13.69□□□□□ -0.22
SSBP4-207ENST00000600244 CXorf66Q5JRM2 361 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms