RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 RAB9BQ9NP90 201 aa11.49□□□□□ -0.57
IRF3-224ENST00000599680 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
IRF3-224ENST00000599680 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
IRF3-224ENST00000599680 PLXNB1O43157 2135 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 ERICH4A6NGS2 130 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 SDCBPO00560 298 aaPredicted RBP11.48□□□□□ -0.57
IRF3-224ENST00000599680 OR2F2O95006 317 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 MGMTP16455 207 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 HES1Q14469 280 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 SPHARQ15513 63 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 ACSM3Q53FZ2 586 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 RBM48Q5RL73 367 aaKnown RBP11.48□□□□□ -0.57
IRF3-224ENST00000599680 RNLSQ5VYX0 342 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 RAB12Q6IQ22 244 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 ZNF497Q6ZNH5 498 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 NRG4Q8WWG1 115 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 RBM14Q96PK6 669 aaKnown RBP11.48□□□□□ -0.57
IRF3-224ENST00000599680 UQCC2Q9BRT2 126 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 CST11Q9H112 138 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 ETAA1Q9NY74 926 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 TRAPPC2LQ9UL33 140 aa11.48□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A10PA6NDY2 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A18PA6NE21 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A16PA6NEW6 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A20PA6NIJ5 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A7PA6NKC0 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A12PA8MX19 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A5PA8MXJ8 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A23PA8MXZ1 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 H0YHG0 523 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 LY6LH3BQJ8 138 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 M0QZK8 103 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 PIN1P1O15428 100 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 SPINT2O43291 252 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 WIPF1O43516 503 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A15PP0C7V4 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A13PP0C7W8 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A14PP0C7W9 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM90A24PP0C7X0 464 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 RAB7AP51149 207 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 ABCA11PQ4W5N1 156 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 C9orf152Q5JTZ5 239 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 UTF1Q5T230 341 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 C6orf183Q5T699 404 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 GLT8D1Q68CQ7 371 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 HIST2H2BDQ6DRA6 164 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 UFD1Q92890 307 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 CCDC90BQ9GZT6 254 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 PEX16Q9Y5Y5 336 aa11.47□□□□□ -0.57
IRF3-224ENST00000599680 A0A1W2PPE3 182 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 RGS10O43665 173 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 ORC5O43913 435 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 MT-ND4P03905 459 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 UBBP0CG47 229 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 HSMCR30P0CW71 290 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 CD28P10747 220 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 FUT3P21217 361 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 MYF6P23409 242 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 IL3RAP26951 378 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 HSPA13P48723 471 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 EMX1Q04741 257 aaPredicted RBP11.46□□□□□ -0.57
IRF3-224ENST00000599680 INSL4Q14641 139 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 HSD17B12Q53GQ0 312 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 Q6ZS46 218 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 CEACAM19Q7Z692 300 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 CENPVQ7Z7K6 275 aaPredicted RBP11.46□□□□□ -0.57
IRF3-224ENST00000599680 OR8H3Q8N146 312 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 OR56B4Q8NH76 319 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 UBALD1Q8TB05 177 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 PHYHIPQ92561 330 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 FAM46BQ96A09 425 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
IRF3-224ENST00000599680 GHRLQ9UBU3 117 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.57
IRF3-224ENST00000599680 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 UBE2QL1A1L167 161 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 HSD17B6O14756 317 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 KCNAB3O43448 404 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 MPIG6BO95866 241 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 LPLP06858 475 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 SNRNP70P08621 437 aaKnown RBP11.45□□□□□ -0.58
IRF3-224ENST00000599680 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 TMEM11P17152 192 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 SLC35A2P78381 396 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 FAM27D1Q5T7N8 215 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 SYT6Q5T7P8 510 aaPredicted RBP11.45□□□□□ -0.58
IRF3-224ENST00000599680 LIPKQ5VXJ0 399 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 UNQ9370/PRO34162Q6UXP9 181 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 PRR18Q8N4B5 295 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 DRAM1Q8N682 238 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 TMEM104Q8NE00 496 aa11.45□□□□□ -0.58
IRF3-224ENST00000599680 OR5AU1Q8NGC0 362 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms