RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF497Q6ZNH5 498 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 Q6ZS46 218 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 GAPTQ8N292 157 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 NKAIN3Q8N8D7 197 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 RBM14Q96PK6 669 aaKnown RBP8.42□□□□□ -1.06
CCDC9-203ENST00000596938 OCSTAMPQ9BR26 566 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 DUSP21Q9H596 190 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 RCC2Q9P258 522 aaKnown RBP8.42□□□□□ -1.06
CCDC9-203ENST00000596938 LSM2Q9Y333 95 aaKnown RBP8.42□□□□□ -1.06
CCDC9-203ENST00000596938 TPRKBQ9Y3C4 175 aa8.42□□□□□ -1.06
CCDC9-203ENST00000596938 AMMECR1Q9Y4X0 333 aaPredicted RBP8.42□□□□□ -1.06
CCDC9-203ENST00000596938 TRAV39A0A0B4J263 110 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 MCRIP1C9JLW8 97 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 WIPF1O43516 503 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 CA11O75493 328 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 MYF6P23409 242 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 SSTR5P35346 364 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 RAB7AP51149 207 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 AQP4P55087 323 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 GP2P55259 537 aaKnown RBP8.41□□□□□ -1.06
CCDC9-203ENST00000596938 DEFA6Q01524 100 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 EMX1Q04741 257 aaPredicted RBP8.41□□□□□ -1.06
CCDC9-203ENST00000596938 GABPB1Q06547 395 aaPredicted RBP8.41□□□□□ -1.06
CCDC9-203ENST00000596938 MADCAM1Q13477 382 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 AWAT2Q6E213 333 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 CAPSLQ8WWF8 208 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 PHYHIPQ92561 330 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 LEAP2Q969E1 77 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 RPEQ96AT9 228 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 OR5M11Q96RB7 305 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 ANKRD60Q9BZ19 345 aa8.41□□□□□ -1.06
CCDC9-203ENST00000596938 M0QZK8 103 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 KCNAB3O43448 404 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 PEX14O75381 377 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 FBXO24O75426 580 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 SC5DO75845 299 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 AMY1AP04745 511 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 AMY2AP04746 511 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 UBBP0CG47 229 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 MGMTP16455 207 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 SRMP19623 302 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 FUT3P21217 361 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 VDAC2P45880 294 aaPredicted RBP8.4□□□□□ -1.06
CCDC9-203ENST00000596938 LOXL3P58215 753 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 TPBGQ13641 420 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 INSL4Q14641 139 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 LTC4SQ16873 150 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 Q3ZCU0 254 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 C1orf100Q5SVJ3 147 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 RAB12Q6IQ22 244 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 CEACAM19Q7Z692 300 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 LRRTM1Q86UE6 522 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 OR8H3Q8N146 312 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 LINC00311Q8N616 119 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 C11orf44Q8N8P7 122 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 TMEM104Q8NE00 496 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 OR10X1Q8NGY0 326 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
CCDC9-203ENST00000596938 NEK7Q8TDX7 302 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 SGCDQ92629 289 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 TOMM40LQ969M1 308 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 ARL11Q969Q4 196 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 Q96M66 194 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 SLC25A33Q9BSK2 321 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 SELENOIQ9C0D9 397 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 VCX3BQ9H321 246 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 BANF2Q9H503 90 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 RAB9BQ9NP90 201 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 ISYNA1Q9NPH2 558 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 PEX16Q9Y5Y5 336 aa8.4□□□□□ -1.06
CCDC9-203ENST00000596938 AIPO00170 330 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 SDCBPO00560 298 aaPredicted RBP8.39□□□□□ -1.07
CCDC9-203ENST00000596938 CRTAPO75718 401 aaPredicted RBP8.39□□□□□ -1.07
CCDC9-203ENST00000596938 IGHV3-7P01780 117 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 OPN1MWP04001 364 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 GAPDHP04406 335 aaKnown RBP8.39□□□□□ -1.07
CCDC9-203ENST00000596938 UCHL1P09936 223 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 OPN1MW2P0DN77 364 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 OPN1MW3P0DN78 364 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 CD28P10747 220 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 CRHBPP24387 322 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 MED22Q15528 200 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 ABCA11PQ4W5N1 156 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 FBLN7Q53RD9 439 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 ARSJQ5FYB0 599 aaPredicted RBP8.39□□□□□ -1.07
CCDC9-203ENST00000596938 SYT6Q5T7P8 510 aaPredicted RBP8.39□□□□□ -1.07
CCDC9-203ENST00000596938 STEAP3Q658P3 488 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 SIGIRRQ6IA17 410 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 ZNF554Q86TJ5 538 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 NDUFA11Q86Y39 141 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 OR5AU1Q8NGC0 362 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 CCDC107Q8WV48 283 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 TMED9Q9BVK6 235 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 CST11Q9H112 138 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 GFOD1Q9NXC2 390 aa8.39□□□□□ -1.07
CCDC9-203ENST00000596938 ETAA1Q9NY74 926 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms