RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 TOMM40LQ969M1 308 aa19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 RAB1BQ9H0U4 201 aa19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 LIME1Q9H400 295 aa19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 TAF9BQ9HBM6 251 aa19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 RANGRFQ9HD47 186 aaPredicted RBP19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 PPIAL4AQ9Y536 164 aa19.22■□□□□ 0.67
SPTBN4-210ENST00000596900 VAMP1P23763 118 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 PPP1R1AQ13522 171 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 HFEQ30201 348 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 LPCAT3Q6P1A2 487 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 TGIF2LYQ8IUE0 185 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 ZNRF1Q8ND25 227 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 KIRREL1Q96J84 757 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 RTBDNQ9BSG5 229 aaPredicted RBP19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 FXYD6Q9H0Q3 95 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 FAM234AQ9H0X4 552 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 DNTTIP1Q9H147 329 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 CLEC4MQ9H2X3 399 aaPredicted RBP19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 EPG5Q9HCE0 2579 aa19.21■□□□□ 0.67
SPTBN4-210ENST00000596900 TRBV6-7A0A0A0MS04 114 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 NPIPB11E5RHQ5 1161 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 ZNF205O95201 554 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 ANXA3P12429 323 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 AADACP22760 399 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 ZBTB25P24278 435 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 EDDM3AQ14507 147 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 C11orf88Q6PI97 169 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 SLC38A6Q8IZM9 456 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 TCTE3Q8IZS6 198 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 SPICQ8N5J4 248 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 IL1F10Q8WWZ1 152 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 MAB21L2Q9Y586 359 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 IGKV1-6A0A0C4DH72 117 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 C9orf170A2RU37 121 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 DHODHQ02127 395 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 MEX3BQ6ZN04 569 aaKnown RBP19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 ZNF788Q6ZQV5 615 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 PRR18Q8N4B5 295 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 C12orf45Q8N5I9 185 aaPredicted RBP19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 DCAF16Q9NXF7 216 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 MGAT4CQ9UBM8 478 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 SLC23A1Q9UHI7 598 aa19.2■□□□□ 0.66
SPTBN4-210ENST00000596900 DSCAMO60469 2012 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 TRAV39A0A0B4J263 110 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 GYPAP02724 150 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 PI3P19957 117 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 GLIPR1P48060 266 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 KCNJ8Q15842 424 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 ABCA11PQ4W5N1 156 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 GALMQ96C23 342 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 ZNF486Q96H40 463 aaPredicted RBP19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 LURAP1Q96LR2 239 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 PHB2Q99623 299 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 OPN4Q9UHM6 478 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 KLF2Q9Y5W3 355 aaPredicted RBP19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 ABCA4P78363 2273 aa19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 RAI1Q7Z5J4 1906 aaPredicted RBP19.19■□□□□ 0.66
SPTBN4-210ENST00000596900 A6NNC1 897 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 HSPA12AO43301 675 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 TUSC2O75896 110 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 DUS4LO95620 317 aaKnown RBP19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 CXCL3P19876 107 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 EIF2B2P49770 351 aaKnown RBP19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 DTX2Q86UW9 622 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 UXS1Q8NBZ7 420 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 OR2AK2Q8NG84 335 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 GAFA1Q96PS6 74 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 FYTTD1Q96QD9 318 aaKnown RBP19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 NCOR1P1Q9H4R4 102 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 SIGLEC5O15389 551 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 CD34P28906 385 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 IL2RGP31785 369 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 P2RX3P56373 397 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 ZFP69Q49AA0 526 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 C11orf71Q6IPW1 123 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 ZNF565Q8N9K5 539 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 TMEM230Q96A57 120 aa19.18■□□□□ 0.66
SPTBN4-210ENST00000596900 ZFYVE26Q68DK2 2539 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 ODAMA1E959 279 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 DANCRP0C864 163 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 ERP29P30040 261 aaKnown RBP19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 EDDM3BP56851 147 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 SGPP2Q8IWX5 399 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 H1FOOQ8IZA3 346 aaPredicted RBP19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 TPRX1Q8N7U7 411 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 MRGPRDQ8TDS7 321 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 MITD1Q8WV92 249 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 CCL13Q99616 98 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 OR6C3Q9NZP0 311 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 OR2W1Q9Y3N9 320 aa19.17■□□□□ 0.66
SPTBN4-210ENST00000596900 C12orf77C9JDV5 145 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 TMPRSS2O15393 492 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 GZMHP20718 246 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 C5orf24Q7Z6I8 188 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 CCDC71LQ8N9Z2 235 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 NEU4Q8WWR8 484 aaPredicted RBP19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 ZNF436Q9C0F3 470 aaPredicted RBP19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 RAB9BQ9NP90 201 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 DLL4Q9NR61 685 aa19.16■□□□□ 0.66
SPTBN4-210ENST00000596900 SPINT2O43291 252 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms