RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 C15orf65H3BRN8 121 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 SLC31A2O15432 143 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 MAGEB3O15480 346 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 OR7C1O76099 320 aaPredicted RBP12.63□□□□□ -0.39
LIM2-202ENST00000596399 LIMS3P0CW19 117 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 LIMS4P0CW20 117 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 GPR12P47775 334 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
LIM2-202ENST00000596399 SLC35B1P78383 322 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 PAX5Q02548 391 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 ZNF816Q0VGE8 651 aaPredicted RBP12.63□□□□□ -0.39
LIM2-202ENST00000596399 EBI3Q14213 229 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 SMN1Q16637 294 aaKnown RBP12.63□□□□□ -0.39
LIM2-202ENST00000596399 Q8N6K4 173 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 OR10A7Q8NGE5 316 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 OR52N1Q8NH53 320 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 APH1BQ8WW43 257 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 DCLRE1BQ9H816 532 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 PLSCR3Q9NRY6 295 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 FAM118AQ9NWS6 357 aa12.63□□□□□ -0.39
LIM2-202ENST00000596399 H0YHG0 523 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 CCL24O00175 119 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 SDCBPO00560 298 aaPredicted RBP12.62□□□□□ -0.39
LIM2-202ENST00000596399 GAPDHP04406 335 aaKnown RBP12.62□□□□□ -0.39
LIM2-202ENST00000596399 SERPINA2P20848 420 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 ETV1P50549 477 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 RBM11P57052 281 aaKnown RBP12.62□□□□□ -0.39
LIM2-202ENST00000596399 RAB40BQ12829 278 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 ATAD3CQ5T2N8 411 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 SLC16A12Q6ZSM3 486 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 FOXRED2Q8IWF2 684 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 Q8N9W7 124 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 ARL11Q969Q4 196 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 WWC2-AS2Q96NR7 200 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 HSPB9Q9BQS6 159 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 MCRIP2Q9BUT9 160 aaKnown RBP12.62□□□□□ -0.39
LIM2-202ENST00000596399 GPR61Q9BZJ8 451 aa12.62□□□□□ -0.39
LIM2-202ENST00000596399 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 MAGEA13PA6NCF6 341 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 KCNJ3P48549 501 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 DGCR2P98153 550 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 DDI2Q5TDH0 399 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 OR2G6Q5TZ20 316 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 TEX38Q6PEX7 206 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 TGIF2LXQ8IUE1 241 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 TMEM104Q8NE00 496 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 RTN4IP1Q8WWV3 396 aaPredicted RBP12.61□□□□□ -0.39
LIM2-202ENST00000596399 ST6GALNAC6Q969X2 333 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 TMEM106AQ96A25 262 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
LIM2-202ENST00000596399 PRR25Q96S07 402 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 METTL9Q9H1A3 318 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 ABCG5Q9H222 651 aa12.61□□□□□ -0.39
LIM2-202ENST00000596399 LOC100130705A0A1B0GUX0 176 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 AP4M1O00189 453 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 MT-ND4P03905 459 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 GZMHP20718 246 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 ZNF93P35789 620 aaPredicted RBP12.6□□□□□ -0.39
LIM2-202ENST00000596399 ZNF134P52741 427 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 F2RL1P55085 397 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 MRPL28Q13084 256 aaKnown RBP12.6□□□□□ -0.39
LIM2-202ENST00000596399 PNLIPRP3Q17RR3 467 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 NHLRC3Q5JS37 347 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 UNQ9370/PRO34162Q6UXP9 181 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 IZUMO1Q8IYV9 350 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 COMMD1Q8N668 190 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 OR2T10Q8NGZ9 312 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 Q96MT0 163 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 IFT22Q9H7X7 185 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 MRPS18AQ9NVS2 196 aaKnown RBP12.6□□□□□ -0.39
LIM2-202ENST00000596399 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
LIM2-202ENST00000596399 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
LIM2-202ENST00000596399 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
LIM2-202ENST00000596399 LALBAP00709 142 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 CSTBP04080 98 aaKnown RBP12.59□□□□□ -0.39
LIM2-202ENST00000596399 BDKRB2P30411 391 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 SLC6A1P30531 599 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 GPR50Q13585 617 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 SLC22A6Q4U2R8 563 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 RPL22L1Q6P5R6 122 aaKnown RBP12.59□□□□□ -0.39
LIM2-202ENST00000596399 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 MYCBPQ99417 103 aaPredicted RBP12.59□□□□□ -0.39
LIM2-202ENST00000596399 S1PR3Q99500 378 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 TMEM138Q9NPI0 162 aa12.59□□□□□ -0.39
LIM2-202ENST00000596399 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
LIM2-202ENST00000596399 C12orf77C9JDV5 145 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 MPZL2O60487 215 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 MOSP00540 346 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 CD2P06729 351 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 CFHR3Q02985 330 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 KLHL22Q53GT1 634 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
LIM2-202ENST00000596399 PRR18Q8N4B5 295 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms