RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
LIG1-210ENST00000596332 ZNF69Q9UC07 566 aa8.62□□□□□ -1.03
LIG1-210ENST00000596332 ETV7Q9Y603 341 aa8.62□□□□□ -1.03
LIG1-210ENST00000596332 IGHV3OR16-10A0A075B7F0 116 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 IGKV1D-8A0A087WSZ0 117 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 A0A087X0M5 115 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 A0A1B0GX30 115 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 A0A1W2PQ09 198 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 TMEM30CPA0ZSE6 113 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 ZNF729A6NN14 1252 aaPredicted RBP8.61□□□□□ -1.03
LIG1-210ENST00000596332 C12orf77C9JDV5 145 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 CA11O75493 328 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 PTHLHP12272 177 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 CDK2P24941 298 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 RBM39Q14498 530 aaKnown RBP8.61□□□□□ -1.03
LIG1-210ENST00000596332 RUSC1-AS1Q66K80 236 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 DTX3Q8N9I9 347 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 OR11H6Q8NGC7 330 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 RFESDQ8TAC1 157 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 UBALD1Q8TB05 177 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 C17orf50Q8WW18 174 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 LHX4Q969G2 390 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 RAB3CQ96E17 227 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 KIRREL1Q96J84 757 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 NEDD4LQ96PU5 975 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 PRDM13Q9H4Q3 707 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 PLEKHJ1Q9NW61 149 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 CALYQ9NYX4 217 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 OR6C3Q9NZP0 311 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 LPAR3Q9UBY5 353 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 CDC42EP3Q9UKI2 254 aa8.61□□□□□ -1.03
LIG1-210ENST00000596332 TRGV10A0A0A0MS01 117 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 TRAV40A0A0B4J280 105 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 IGKV1-6A0A0C4DH72 117 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 F2RL2O00254 374 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 ORC5O43913 435 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 HPGDSO60760 199 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 IGHV1-69P01742 117 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 GZMHP20718 246 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 CD34P28906 385 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 HMGN3Q15651 99 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 PRAMEF5Q5TYX0 476 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 METTL11BQ5VVY1 283 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 BRD3OSQ6XYD6 125 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 ZNF782Q6ZMW2 699 aaPredicted RBP8.6□□□□□ -1.03
LIG1-210ENST00000596332 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 DYNAPQ8N1N2 210 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 SAMD12Q8N8I0 201 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 NANPQ8TBE9 248 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 CMTM3Q96MX0 182 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 TSC22D3Q99576 134 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 AUNIPQ9H7T9 357 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 ZNF286AQ9HBT8 521 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 Q9N2K0 584 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 CCDC59Q9P031 241 aaKnown RBP8.6□□□□□ -1.03
LIG1-210ENST00000596332 NDUFA13Q9P0J0 144 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 COMMD3Q9UBI1 195 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 RSL24D1Q9UHA3 163 aaKnown RBP8.6□□□□□ -1.03
LIG1-210ENST00000596332 NUP50Q9UKX7 468 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 KIAA2026Q5HYC2 2103 aa8.6□□□□□ -1.03
LIG1-210ENST00000596332 A0A075B6Q4 140 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 TRAV18A0A075B6X5 111 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 SMIM31A0A1B0GVY4 71 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 FUOMA2VDF0 154 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 METTL21EPA6NDL7 271 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 H3BUI4 141 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 XRCC3O43542 346 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 CLPXO76031 633 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 IGLV1-47P01700 117 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 APOA1P02647 267 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 RANBP1P43487 201 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 UBE2E1P51965 193 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZNF134P52741 427 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 HERPUD1Q15011 391 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 UBE2NLQ5JXB2 153 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 PRIMA1Q86XR5 153 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZNF565Q8N9K5 539 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZNF439Q8NDP4 499 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZNF596Q8TC21 504 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZFAND2BQ8WV99 257 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ACOT12Q8WYK0 555 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 C22orf15Q8WYQ4 148 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 DGCR14Q96DF8 476 aaKnown RBP8.59□□□□□ -1.03
LIG1-210ENST00000596332 SOSTQ9BQB4 213 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 BEX2Q9BXY8 128 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 TMEM133Q9H2Q1 129 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 TAF9BQ9HBM6 251 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 IDI2-AS1Q9NZ38 188 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 ZNF230Q9UIE0 474 aaPredicted RBP8.59□□□□□ -1.03
LIG1-210ENST00000596332 SESN1Q9Y6P5 492 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 NAV3Q8IVL0 2385 aa8.59□□□□□ -1.03
LIG1-210ENST00000596332 A0A0A6YYH2 397 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms