RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 FBLN7Q53RD9 439 aa9□□□□□ -0.97
VRK3-210ENST00000596121 SYT6Q5T7P8 510 aaPredicted RBP9□□□□□ -0.97
VRK3-210ENST00000596121 HES5Q5TA89 166 aa9□□□□□ -0.97
VRK3-210ENST00000596121 CCBE1Q6UXH8 406 aaPredicted RBP9□□□□□ -0.97
VRK3-210ENST00000596121 C12orf54Q6X4T0 127 aa9□□□□□ -0.97
VRK3-210ENST00000596121 ZNF565Q8N9K5 539 aa9□□□□□ -0.97
VRK3-210ENST00000596121 OR51D1Q8NGF3 324 aa9□□□□□ -0.97
VRK3-210ENST00000596121 OR4K15Q8NH41 348 aa9□□□□□ -0.97
VRK3-210ENST00000596121 MALSU1Q96EH3 234 aa9□□□□□ -0.97
VRK3-210ENST00000596121 SULT4A1Q9BR01 284 aa9□□□□□ -0.97
VRK3-210ENST00000596121 FAAP24Q9BTP7 215 aa9□□□□□ -0.97
VRK3-210ENST00000596121 TM2D1Q9BX74 207 aa9□□□□□ -0.97
VRK3-210ENST00000596121 CLEC7AQ9BXN2 247 aa9□□□□□ -0.97
VRK3-210ENST00000596121 CST11Q9H112 138 aa9□□□□□ -0.97
VRK3-210ENST00000596121 SLITRK2Q9H156 845 aa9□□□□□ -0.97
VRK3-210ENST00000596121 LPAR5Q9H1C0 372 aa9□□□□□ -0.97
VRK3-210ENST00000596121 OR51E2Q9H255 320 aa9□□□□□ -0.97
VRK3-210ENST00000596121 DPAGT1Q9H3H5 408 aa9□□□□□ -0.97
VRK3-210ENST00000596121 RNF167Q9H6Y7 350 aa9□□□□□ -0.97
VRK3-210ENST00000596121 TXNL4BQ9NX01 149 aaKnown RBP9□□□□□ -0.97
VRK3-210ENST00000596121 IDI2-AS1Q9NZ38 188 aa9□□□□□ -0.97
VRK3-210ENST00000596121 VPREB3Q9UKI3 123 aa9□□□□□ -0.97
VRK3-210ENST00000596121 TBL2Q9Y4P3 447 aaKnown RBP9□□□□□ -0.97
VRK3-210ENST00000596121 HILPDAQ9Y5L2 63 aa9□□□□□ -0.97
VRK3-210ENST00000596121 V9GY05 133 aa9□□□□□ -0.97
VRK3-210ENST00000596121 A0A0B4J203 849 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 SMIM30A4D0T7 59 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 VGLL3A8MV65 326 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 C12orf77C9JDV5 145 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 MCRIP1C9JLW8 97 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 SOCS1O15524 211 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 CHST1O43916 411 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 PDCD6O75340 191 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 RCC1P18754 421 aaPredicted RBP8.99□□□□□ -0.97
VRK3-210ENST00000596121 CFPP27918 469 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 EFNB2P52799 333 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 TMEM50BP56557 158 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 RAB11BQ15907 218 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 LRRC75BQ2VPJ9 315 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 C2orf76Q3KRA6 126 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 NKAPLQ5M9Q1 402 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 OR52W1Q6IF63 320 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 Q6ZSV7 163 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 C6orf201Q7Z4U5 140 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 KCNG3Q8TAE7 436 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 MRPL30Q8TCC3 161 aaKnown RBP8.99□□□□□ -0.97
VRK3-210ENST00000596121 NEK7Q8TDX7 302 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 FCGR1BQ92637 280 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 FAM3DQ96BQ1 224 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 TMEM59Q9BXS4 323 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 PLGRKTQ9HBL7 147 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 SPACA1Q9HBV2 294 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 ETAA1Q9NY74 926 aa8.99□□□□□ -0.97
VRK3-210ENST00000596121 TMEM272A0A1B0GTI8 110 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 A0A1W2PPE3 182 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 AIPO00170 330 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 NDUFA7O95182 113 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 GLAP06280 429 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 SLC2A2P11168 524 aaPredicted RBP8.98□□□□□ -0.97
VRK3-210ENST00000596121 ARSBP15848 533 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 GALP22466 123 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 GADD45AP24522 165 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 FGF9P31371 208 aaPredicted RBP8.98□□□□□ -0.97
VRK3-210ENST00000596121 RAG2P55895 527 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 LOXL3P58215 753 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 KRTAP10-3P60369 221 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 SRSF4Q08170 494 aaKnown RBP8.98□□□□□ -0.97
VRK3-210ENST00000596121 FOXL1Q12952 345 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 DIAPH2-AS1Q14236 149 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 RBM39Q14498 530 aaKnown RBP8.98□□□□□ -0.97
VRK3-210ENST00000596121 FAM189A2Q15884 450 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 AANATQ16613 207 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 HLA-DRB5Q30154 266 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 MINOS1Q5TGZ0 78 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 OR2W3Q7Z3T1 314 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 FAM89BQ8N5H3 189 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 OR5R1Q8NH85 324 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 OR1L1Q8NH94 360 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 ARL11Q969Q4 196 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 STUB1Q9UNE7 303 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 PSG11Q9UQ72 335 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 MINOS1-NBL1R4GNA1 71 aa8.98□□□□□ -0.97
VRK3-210ENST00000596121 IGHV3-43A0A0B4J1X8 118 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 A6NDX4 124 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 IFITM5A6NNB3 132 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 BUB1B-PAK6H3BSN5 160 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 J3QR06 171 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 F2RL2O00254 374 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 SLC31A2O15432 143 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 ORC5O43913 435 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 CLEC2LP0C7M8 214 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 IGHV3-43DP0DP04 118 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 GZMHP20718 246 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 CD24P25063 80 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 HTR1DP28221 377 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 BLVRBP30043 206 aaPredicted RBP8.97□□□□□ -0.97
VRK3-210ENST00000596121 PLAC9Q5JTB6 97 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 GDPGP1Q6ZNW5 385 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 TSPAN14Q8NG11 270 aa8.97□□□□□ -0.97
VRK3-210ENST00000596121 LINC01006Q8NI28 216 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms