RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 CCDC107Q8WV48 283 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 NRGNQ92686 78 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 CABLES2Q9BTV7 478 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 SLC25A10Q9UBX3 287 aaPredicted RBP12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 TRAPPC2LQ9UL33 140 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 ITPR2Q14571 2701 aa12.23□□□□□ -0.45
SHKBP1-211ENST00000595945 MEIKINA0A087WXM9 373 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 FUOMA2VDF0 154 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 F5H0A9 414 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 NDUFB6O95139 128 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 DIRAS3O95661 229 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 TCRBP04435 133 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 OR3A3P47888 321 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 ARPC4P59998 168 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 EDDM3AQ14507 147 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 HERPUD1Q15011 391 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 C6orf183Q5T699 404 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 TRAT1Q6PIZ9 186 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF782Q6ZMW2 699 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 TCF23Q7RTU1 214 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 LHFPL1Q86WI0 220 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 OR4A4PQ8NGN8 299 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 CORO2AQ92828 525 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 DCTN5Q9BTE1 182 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 GSX2Q9BZM3 304 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 BARX1Q9HBU1 254 aaPredicted RBP12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 MCUBQ9NWR8 336 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 EHFQ9NZC4 300 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
SHKBP1-211ENST00000595945 C12orf77C9JDV5 145 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 C15orf65H3BRN8 121 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 DVL1O14640 695 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 NDUFB3O43676 98 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 WNT2P09544 360 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 CTXN2P0C2S0 81 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 PDLIM4P50479 330 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 MEF2CQ06413 473 aaPredicted RBP12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 LRRC10Q5BKY1 277 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 IGSF11Q5DX21 431 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 HIST2H2BCQ6DN03 193 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 DHRS11Q6UWP2 260 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 BTN2A1Q7KYR7 527 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 SPICQ8N5J4 248 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 ZNF525Q8N782 197 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 MRGPRDQ8TDS7 321 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 PRRT1Q99946 306 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 MMP28Q9H239 520 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 OR6C3Q9NZP0 311 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 MIOXQ9UGB7 285 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 SCP2D1Q9UJQ7 156 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 NUBP2Q9Y5Y2 271 aa12.21□□□□□ -0.45
SHKBP1-211ENST00000595945 TRBV6-7A0A0A0MS04 114 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 VGLL3A8MV65 326 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 TUSC2O75896 110 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 IFNA6P05013 189 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 ATP5J2P56134 94 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 EDDM3BP56851 147 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 RBMS2Q15434 407 aaKnown RBP12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 PLET1Q6UQ28 207 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 OR1L1Q8NH94 360 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 CREB3L1Q96BA8 519 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 KCNIP1Q9NZI2 227 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 PCDHB10Q9UN67 800 aa12.2□□□□□ -0.46
SHKBP1-211ENST00000595945 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 NDUFB7P17568 137 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 GZMHP20718 246 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 GLP1RP43220 463 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 SEC61A1P61619 476 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 CARTPTQ16568 116 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 IDO2Q6ZQW0 420 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 TMEM17Q86X19 198 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 OR8B3Q8NGG8 313 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 C10orf105Q8TEF2 133 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 GIMAP1Q8WWP7 306 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 KIRREL1Q96J84 757 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 OR8B2Q96RD0 313 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 SLC25A21Q9BQT8 299 aaPredicted RBP12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 C19orf12Q9NSK7 152 aa12.19□□□□□ -0.46
SHKBP1-211ENST00000595945 MAP1AP78559 2803 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms