RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 SLC16A12Q6ZSM3 486 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 Q6ZTK2 550 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 OR4K15Q8NH41 348 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 LINC00574Q9H8X3 128 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 HSF4Q9ULV5 492 aa11.7□□□□□ -0.54
LIG1-208ENST00000595758 NPIPB11E5RHQ5 1161 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 ORC5O43913 435 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 TMEM127O75204 238 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 VENTXO95231 258 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 PAHP00439 452 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 NFYBP25208 207 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 SSTR5P35346 364 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 GDNFP39905 211 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 RPL5P46777 297 aaKnown RBP11.69□□□□□ -0.54
LIG1-208ENST00000595758 SERPINB10P48595 397 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 LGALS4P56470 323 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 TMEM50BP56557 158 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 VBP1P61758 197 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
LIG1-208ENST00000595758 BAMBIQ13145 260 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 DYNC1I2Q13409 638 aaKnown RBP11.69□□□□□ -0.54
LIG1-208ENST00000595758 C6orf183Q5T699 404 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 LGALS14Q8TCE9 139 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 ARHGAP5-AS1Q96IT6 56 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 PECRQ9BY49 303 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 NAA50Q9GZZ1 169 aaKnown RBP11.69□□□□□ -0.54
LIG1-208ENST00000595758 ATG5Q9H1Y0 275 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 IDI2-AS1Q9NZ38 188 aa11.69□□□□□ -0.54
LIG1-208ENST00000595758 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ODF3BA8MYP8 253 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 GABARAPO95166 117 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ARG1P05089 322 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 FBP1P09467 338 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 RCC1P18754 421 aaPredicted RBP11.68□□□□□ -0.54
LIG1-208ENST00000595758 SCAND1P57086 179 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 CTF1Q16619 201 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 LTC4SQ16873 150 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 PLAC9Q5JTB6 97 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 TRAT1Q6PIZ9 186 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 BAIAP2L2Q6UXY1 529 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 Q6YL49 198 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ABHD12Q8N2K0 398 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 OR10A7Q8NGE5 316 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 OR10R2Q8NGX6 335 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
LIG1-208ENST00000595758 RAB3CQ96E17 227 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 RIMS4Q9H426 269 aaPredicted RBP11.68□□□□□ -0.54
LIG1-208ENST00000595758 CHMP1AQ9HD42 196 aaPredicted RBP11.68□□□□□ -0.54
LIG1-208ENST00000595758 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 KCNIP1Q9NZI2 227 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 AK3Q9UIJ7 227 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 SCOCQ9UIL1 159 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 ETV7Q9Y603 341 aa11.68□□□□□ -0.54
LIG1-208ENST00000595758 FAM172BPA6NC97 362 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 C12orf77C9JDV5 145 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 C15orf65H3BRN8 121 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 RAB27BO00194 218 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 TOR1AO14656 332 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 SPINT2O43291 252 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 NAPSAO96009 420 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 CD34P28906 385 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 MOGAT2Q3SYC2 334 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 ZDHHC22Q8N966 263 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 OR5H6Q8NGV6 325 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 C17orf50Q8WW18 174 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 SLC25A46Q96AG3 418 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 AJUBAQ96IF1 538 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 MBNL3Q9NUK0 354 aaKnown RBP11.67□□□□□ -0.54
LIG1-208ENST00000595758 ABRACLQ9P1F3 81 aa11.67□□□□□ -0.54
LIG1-208ENST00000595758 TBL2Q9Y4P3 447 aaKnown RBP11.67□□□□□ -0.54
LIG1-208ENST00000595758 A0A087X0M5 115 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 A0A1B0GX30 115 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 DNAJC9-AS1A6NH13 148 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 TRIM77I1YAP6 450 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 HBZP02008 142 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 MELTFP08582 738 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 PRRX1P54821 245 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 UTF1Q5T230 341 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 OLFML2AQ68BL7 652 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 ZNF554Q86TJ5 538 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 CLVS1Q8IUQ0 354 aaPredicted RBP11.66□□□□□ -0.54
LIG1-208ENST00000595758 SETD6Q8TBK2 473 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 ZNF596Q8TC21 504 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 TAF9BQ9HBM6 251 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 C12orf4Q9NQ89 552 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms